Analysis of interatomic Contacts of Structural Units in PDB entry:
3H96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H96 entry

There are 4 chains in PDB entry 3H96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 6THR 142
B
 ASP 6THR 142
C
 GLU 5THR 142
D
 GLU 5THR 142
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3H96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 18Right-handed alpha
Helix 2
2
A
23 27Right-handed 310
Helix 3
3
A
66 70Right-handed 310
Helix 4
4
A
74 84Right-handed alpha
Helix 5
5
A
103 118Right-handed alpha
Helix 6
6
A
119 128Right-handed alpha
Helix 7
7
B
6 18Right-handed alpha
Helix 8
8
B
23 27Right-handed 310
Helix 9
9
B
66 70Right-handed 310
Helix 10
10
B
74 84Right-handed alpha
Helix 11
11
B
103 118Right-handed alpha
Helix 12
12
B
119 129Right-handed alpha
Helix 13
14
C
23 27Right-handed 310
Helix 14
15
C
66 70Right-handed 310
Helix 15
16
C
74 84Right-handed alpha
Helix 16
17
C
103 118Right-handed alpha
Helix 17
18
C
119 129Right-handed alpha
Helix 18
20
D
23 27Right-handed 310
Helix 19
21
D
66 70Right-handed 310
Helix 20
22
D
74 84Right-handed alpha
Helix 21
23
D
103 118Right-handed alpha
Helix 22
24
D
119 128Right-handed alpha
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There are 4 sheets in PDB entry 3H96. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 50first strand
Strand 2
A
31 37anti-parallel
Strand 3
A
85 90anti-parallel
Strand 4
A
93 102anti-parallel
Strand 5
A
136 142anti-parallel
Strand 6
A
60 64anti-parallel
Strand 7
A
52 53anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 50first strand
Strand 2
B
31 37anti-parallel
Strand 3
B
85 90anti-parallel
Strand 4
B
93 102anti-parallel
Strand 5
B
136 141anti-parallel
Strand 6
B
60 64anti-parallel
Strand 7
B
52 53anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
44 50first strand
Strand 2
C
31 37anti-parallel
Strand 3
C
85 90anti-parallel
Strand 4
C
93 102anti-parallel
Strand 5
C
136 142anti-parallel
Strand 6
C
60 64anti-parallel
Strand 7
C
52 53anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
44 50first strand
Strand 2
D
31 37anti-parallel
Strand 3
D
85 90anti-parallel
Strand 4
D
93 102anti-parallel
Strand 5
D
136 141anti-parallel
Strand 6
D
60 64anti-parallel
Strand 7
D
52 53anti-parallel
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