Analysis of interatomic Contacts of Structural Units in PDB entry:
3H9N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3H9N entry

There is 1 chain in PDB entry 3H9N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 8HIS 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3H9N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 40Right-handed 310
Helix 2
2
A
75 81Right-handed alpha
Helix 3
3
A
101 107Right-handed 310
Helix 4
4
A
165 167Right-handed 310
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There are 2 sheets in PDB entry 3H9N. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 54first strand
Strand 2
A
43 47anti-parallel
Strand 3
A
86 90anti-parallel
Strand 4
A
9 18anti-parallel
Strand 5
A
25 29anti-parallel
Strand 6
A
66 70anti-parallel
Strand 7
A
56 61anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
133 138anti-parallel
Strand 3
A
119 128anti-parallel
Strand 4
A
111 114anti-parallel
Strand 5
A
169 172parallel
Strand 6
A
160 164anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il