Analysis of interatomic Contacts of Structural Units in PDB entry:
3HB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HB7 entry

There are 8 chains in PDB entry 3HB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR -3ASN 184
C
ALA 2GLU 183
B
TYR -3GLU 183
D
GLY 0GLU 183
E
ALA 2VAL 199
F
MSE 1GLU 183
G
ALA 2GLU 183
H
ALA 2GLU 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3HB7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
24 29Right-handed 310
Helix 2
2
A
30 44Right-handed alpha
Helix 3
3
A
76 80Right-handed 310
Helix 4
4
A
82 86Right-handed 310
Helix 5
5
A
106 114Right-handed alpha
Helix 6
6
A
128 140Right-handed alpha
Helix 7
7
A
155 170Right-handed alpha
Helix 8
8
A
174 184Right-handed alpha
Helix 9
9
C
25 43Right-handed alpha
Helix 10
10
C
82 86Right-handed 310
Helix 11
11
C
106 114Right-handed alpha
Helix 12
12
C
128 140Right-handed alpha
Helix 13
13
C
155 170Right-handed alpha
Helix 14
14
C
174 182Right-handed alpha
Helix 15
15
B
25 30Right-handed alpha
Helix 16
16
B
30 44Right-handed alpha
Helix 17
17
B
76 80Right-handed 310
Helix 18
18
B
82 86Right-handed 310
Helix 19
19
B
106 115Right-handed alpha
Helix 20
20
B
128 140Right-handed alpha
Helix 21
21
B
155 170Right-handed alpha
Helix 22
22
B
174 182Right-handed alpha
Helix 23
23
D
24 44Right-handed alpha
Helix 24
24
D
82 86Right-handed 310
Helix 25
25
D
106 114Right-handed alpha
Helix 26
26
D
128 140Right-handed alpha
Helix 27
27
D
155 170Right-handed alpha
Helix 28
28
D
174 182Right-handed alpha
Helix 29
29
E
27 29Right-handed 310
Helix 30
30
E
30 43Right-handed alpha
Helix 31
31
E
76 80Right-handed 310
Helix 32
32
E
82 86Right-handed 310
Helix 33
33
E
106 114Right-handed alpha
Helix 34
34
E
128 140Right-handed alpha
Helix 35
35
E
155 167Right-handed alpha
Helix 36
36
E
174 184Right-handed alpha
Helix 37
37
F
24 44Right-handed alpha
Helix 38
38
F
62 67Right-handed 310
Helix 39
39
F
76 80Right-handed 310
Helix 40
40
F
82 86Right-handed 310
Helix 41
41
F
106 115Right-handed alpha
Helix 42
42
F
128 140Right-handed alpha
Helix 43
43
F
155 170Right-handed alpha
Helix 44
44
F
174 183Right-handed alpha
Helix 45
45
G
24 30Right-handed alpha
Helix 46
46
G
30 44Right-handed alpha
Helix 47
47
G
62 67Right-handed 310
Helix 48
48
G
76 80Right-handed 310
Helix 49
49
G
82 86Right-handed 310
Helix 50
50
G
106 114Right-handed alpha
Helix 51
51
G
128 140Right-handed alpha
Helix 52
52
G
155 170Right-handed alpha
Helix 53
53
G
174 182Right-handed alpha
Helix 54
54
H
24 43Right-handed alpha
Helix 55
55
H
82 86Right-handed 310
Helix 56
56
H
106 114Right-handed alpha
Helix 57
57
H
128 140Right-handed alpha
Helix 58
58
H
155 167Right-handed alpha
Helix 59
59
H
174 182Right-handed alpha
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There are 8 sheets in PDB entry 3HB7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
92 96first strand
Strand 2
A
49 56parallel
Strand 3
A
4 9parallel
Strand 4
A
118 124parallel
Strand 5
A
143 152parallel
Strand 6
A
171 173parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
92 96first strand
Strand 2
C
49 56parallel
Strand 3
C
4 9parallel
Strand 4
C
118 124parallel
Strand 5
C
143 152parallel
Strand 6
C
171 173parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
92 96first strand
Strand 2
B
49 56parallel
Strand 3
B
4 9parallel
Strand 4
B
118 124parallel
Strand 5
B
143 152parallel
Strand 6
B
171 173parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
92 96first strand
Strand 2
D
49 56parallel
Strand 3
D
4 9parallel
Strand 4
D
118 124parallel
Strand 5
D
143 152parallel
Strand 6
D
171 173parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
92 96first strand
Strand 2
E
49 56parallel
Strand 3
E
4 9parallel
Strand 4
E
118 124parallel
Strand 5
E
143 152parallel
Strand 6
E
171 173parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
93 96first strand
Strand 2
F
49 56parallel
Strand 3
F
4 9parallel
Strand 4
F
118 124parallel
Strand 5
F
143 152parallel
Strand 6
F
171 173parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
92 96first strand
Strand 2
G
49 56parallel
Strand 3
G
4 9parallel
Strand 4
G
118 124parallel
Strand 5
G
143 152parallel
Strand 6
G
171 173parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
92 96first strand
Strand 2
H
49 56parallel
Strand 3
H
4 9parallel
Strand 4
H
118 124parallel
Strand 5
H
143 152parallel
Strand 6
H
171 173parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il