Analysis of interatomic Contacts of Structural Units in PDB entry:
3HBR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HBR entry

There are 8 chains in PDB entry 3HBR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 25PHE 72
A
 ILE 74PRO 265
B
 TRP 25PHE 72
B
 ILE 74PRO 265
C
 TRP 25PHE 72
C
 ILE 74PRO 265
D
 TRP 25PHE 72
D
 ILE 74PRO 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 3HBR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 37Right-handed alpha
Helix 2
2
A
58 63Right-handed alpha
Helix 3
3
A
68 71Right-handed 310
Helix 4
4
A
72 83Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
110 117Right-handed alpha
Helix 7
7
A
119 131Right-handed alpha
Helix 8
8
A
131 143Right-handed alpha
Helix 9
9
A
155 160Right-handed alpha
Helix 10
10
A
166 178Right-handed alpha
Helix 11
11
A
184 195Right-handed alpha
Helix 12
12
A
243 247Right-handed 310
Helix 13
13
A
248 261Right-handed alpha
Helix 14
14
B
31 38Right-handed alpha
Helix 15
15
B
58 64Right-handed alpha
Helix 16
16
B
68 71Right-handed 310
Helix 17
17
B
72 83Right-handed alpha
Helix 18
18
B
102 106Right-handed 310
Helix 19
19
B
110 117Right-handed alpha
Helix 20
20
B
119 131Right-handed alpha
Helix 21
21
B
131 143Right-handed alpha
Helix 22
22
B
155 160Right-handed alpha
Helix 23
23
B
165 178Right-handed alpha
Helix 24
24
B
184 195Right-handed alpha
Helix 25
25
B
243 247Right-handed 310
Helix 26
26
B
248 261Right-handed alpha
Helix 27
27
C
28 30Right-handed 310
Helix 28
28
C
31 38Right-handed alpha
Helix 29
29
C
60 64Right-handed 310
Helix 30
30
C
68 71Right-handed 310
Helix 31
31
C
72 84Right-handed alpha
Helix 32
32
C
102 106Right-handed 310
Helix 33
33
C
110 117Right-handed alpha
Helix 34
34
C
119 143Right-handed alpha
Helix 35
35
C
155 160Right-handed alpha
Helix 36
36
C
165 178Right-handed alpha
Helix 37
37
C
184 195Right-handed alpha
Helix 38
38
C
243 247Right-handed 310
Helix 39
39
C
248 261Right-handed alpha
Helix 40
40
D
29 39Right-handed 310
Helix 41
41
D
60 63Right-handed 310
Helix 42
42
D
68 71Right-handed 310
Helix 43
43
D
72 84Right-handed alpha
Helix 44
44
D
102 106Right-handed 310
Helix 45
45
D
110 117Right-handed alpha
Helix 46
46
D
119 143Right-handed alpha
Helix 47
47
D
155 160Right-handed alpha
Helix 48
48
D
166 178Right-handed alpha
Helix 49
49
D
184 195Right-handed alpha
Helix 50
50
D
243 247Right-handed 310
Helix 51
51
D
248 261Right-handed alpha
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There are 6 sheets in PDB entry 3HBR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
53 56parallel
Strand 3
A
42 48anti-parallel
Strand 4
A
232 240anti-parallel
Strand 5
A
219 227anti-parallel
Strand 6
A
204 212anti-parallel
Strand 7
A
196 199anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
164 165anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 27first strand
Strand 2
B
53 56parallel
Strand 3
B
42 48anti-parallel
Strand 4
B
231 240anti-parallel
Strand 5
B
219 228anti-parallel
Strand 6
B
204 212anti-parallel
Strand 7
B
196 199anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 56first strand
Strand 2
C
42 48anti-parallel
Strand 3
C
232 240anti-parallel
Strand 4
C
219 227anti-parallel
Strand 5
C
204 212anti-parallel
Strand 6
C
196 199anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
26 27first strand
Strand 2
D
53 56parallel
Strand 3
D
42 48anti-parallel
Strand 4
D
232 240anti-parallel
Strand 5
D
219 227anti-parallel
Strand 6
D
204 212anti-parallel
Strand 7
D
196 199anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 66first strand
Strand 2
D
164 165anti-parallel
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