Analysis of interatomic Contacts of Structural Units in PDB entry:
3HF7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HF7 entry

There is 1 chain in PDB entry 3HF7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 201GLY 327
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 3HF7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
203 208Right-handed alpha
Helix 2
2
A
212 214Right-handed 310
Helix 3
3
A
222 232Right-handed alpha
Helix 4
4
A
244 246Right-handed 310
Helix 5
5
A
254 262Right-handed alpha
Helix 6
6
A
268 276Right-handed alpha
Helix 7
7
A
287 299Right-handed alpha
Helix 8
8
A
318 327Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3HF7. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
312 317anti-parallel
Strand 3
A
302 306anti-parallel
Strand 4
A
281 283parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
237 241parallel
Strand 3
A
248 253anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il