Analysis of interatomic Contacts of Structural Units in PDB entry:
3HFT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HFT entry

There is 1 chain in PDB entry 3HFT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 15ILE 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 3HFT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
30 34Right-handed 310
Helix 3
3
A
48 63Right-handed alpha
Helix 4
4
A
75 83Right-handed alpha
Helix 5
5
A
94 100Right-handed alpha
Helix 6
6
A
105 115Right-handed alpha
Helix 7
7
A
125 129Right-handed 310
Helix 8
8
A
131 141Right-handed alpha
Helix 9
9
A
178 185Right-handed alpha
Helix 10
10
A
207 214Right-handed alpha
Helix 11
11
A
217 224Right-handed alpha
Helix 12
12
A
225 228Right-handed 310
Helix 13
13
A
233 238Right-handed 310
Helix 14
14
A
243 256Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3HFT. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
66 70parallel
Strand 3
A
38 43parallel
Strand 4
A
202 206parallel
Strand 5
A
176 177parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
145 146parallel
Strand 3
A
170 171parallel
Strand 4
A
162 163anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il