Analysis of interatomic Contacts of Structural Units in PDB entry:
3HGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HGJ entry

There are 4 chains in PDB entry 3HGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 349
B
 ALA 2PHE 349
C
 ALA 2PHE 349
D
 ALA 2PHE 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 3HGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 6Right-handed 310
Helix 2
2
A
36 49Right-handed alpha
Helix 3
3
A
62 66Right-handed 310
Helix 4
4
A
76 78Right-handed 310
Helix 5
5
A
79 93Right-handed alpha
Helix 6
6
A
104 108Right-handed 310
Helix 7
7
A
112 116Right-handed 310
Helix 8
8
A
143 164Right-handed alpha
Helix 9
9
A
177 184Right-handed alpha
Helix 10
10
A
197 216Right-handed alpha
Helix 11
11
A
237 251Right-handed alpha
Helix 12
12
A
276 288Right-handed alpha
Helix 13
13
A
299 309Right-handed alpha
Helix 14
14
A
319 324Right-handed alpha
Helix 15
15
A
326 335Right-handed alpha
Helix 16
16
A
342 349Right-handed 310
Helix 17
17
B
2 6Right-handed 310
Helix 18
18
B
36 49Right-handed alpha
Helix 19
19
B
62 66Right-handed 310
Helix 20
20
B
76 78Right-handed 310
Helix 21
21
B
79 93Right-handed alpha
Helix 22
22
B
104 108Right-handed 310
Helix 23
23
B
112 116Right-handed 310
Helix 24
24
B
143 164Right-handed alpha
Helix 25
25
B
177 184Right-handed alpha
Helix 26
26
B
197 216Right-handed alpha
Helix 27
27
B
237 251Right-handed alpha
Helix 28
28
B
276 288Right-handed alpha
Helix 29
29
B
299 309Right-handed alpha
Helix 30
30
B
318 324Right-handed alpha
Helix 31
31
B
326 335Right-handed alpha
Helix 32
32
B
342 349Right-handed 310
Helix 33
33
C
2 6Right-handed 310
Helix 34
34
C
36 49Right-handed alpha
Helix 35
35
C
62 66Right-handed 310
Helix 36
36
C
76 78Right-handed 310
Helix 37
37
C
79 93Right-handed alpha
Helix 38
38
C
104 108Right-handed 310
Helix 39
39
C
112 116Right-handed 310
Helix 40
40
C
143 164Right-handed alpha
Helix 41
41
C
177 184Right-handed alpha
Helix 42
42
C
197 214Right-handed alpha
Helix 43
43
C
237 251Right-handed alpha
Helix 44
44
C
276 288Right-handed alpha
Helix 45
45
C
299 309Right-handed alpha
Helix 46
46
C
318 324Right-handed alpha
Helix 47
47
C
326 335Right-handed alpha
Helix 48
48
C
342 349Right-handed 310
Helix 49
49
D
2 6Right-handed 310
Helix 50
50
D
36 49Right-handed alpha
Helix 51
51
D
62 66Right-handed 310
Helix 52
52
D
76 78Right-handed 310
Helix 53
53
D
79 93Right-handed alpha
Helix 54
54
D
104 108Right-handed 310
Helix 55
55
D
112 116Right-handed 310
Helix 56
56
D
143 164Right-handed alpha
Helix 57
57
D
177 184Right-handed alpha
Helix 58
58
D
197 202Right-handed alpha
Helix 59
59
D
202 216Right-handed alpha
Helix 60
60
D
237 252Right-handed alpha
Helix 61
61
D
276 288Right-handed alpha
Helix 62
62
D
299 309Right-handed alpha
Helix 63
63
D
318 324Right-handed alpha
Helix 64
64
D
326 335Right-handed alpha
Helix 65
65
D
342 349Right-handed 310
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There are 12 sheets in PDB entry 3HGJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
13 15anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
53 60parallel
Strand 3
A
96 102parallel
Strand 4
A
168 173parallel
Strand 5
A
222 227parallel
Strand 6
A
255 259parallel
Strand 7
A
290 293parallel
Strand 8
A
314 317parallel
Strand 9
A
19 21parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
140 141parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
13 15anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
53 60parallel
Strand 3
B
96 102parallel
Strand 4
B
168 173parallel
Strand 5
B
222 227parallel
Strand 6
B
255 259parallel
Strand 7
B
291 293parallel
Strand 8
B
314 317parallel
Strand 9
B
19 21parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 126first strand
Strand 2
B
140 141parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 10first strand
Strand 2
C
13 15anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 21first strand
Strand 2
C
53 60parallel
Strand 3
C
96 102parallel
Strand 4
C
168 173parallel
Strand 5
C
222 227parallel
Strand 6
C
255 259parallel
Strand 7
C
290 293parallel
Strand 8
C
314 317parallel
Strand 9
C
19 21parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 126first strand
Strand 2
C
140 141parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 10first strand
Strand 2
D
13 15anti-parallel
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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 73first strand
Strand 2
D
53 60parallel
Strand 3
D
96 102parallel
Strand 4
D
168 173parallel
Strand 5
D
222 227parallel
Strand 6
D
255 259parallel
Strand 7
D
291 293parallel
Strand 8
D
314 317parallel
Strand 9
D
19 21parallel
Strand 10
D
53 60parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
125 126first strand
Strand 2
D
140 141parallel
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