Analysis of interatomic Contacts of Structural Units in PDB entry:
3HGK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HGK entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 12 chains in PDB entry 3HGK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 31LEU 197
A
 VAL 200GLU 318
B
 VAL 32LEU 197
B
 VAL 200SER 319
C
 ASP 33LEU 197
C
 VAL 200GLU 318
D
 LEU 31LEU 197
D
 VAL 200GLU 318
E
 GLY 124HIS 200
F
 GLY 124HIS 200
G
 GLY 124HIS 200
H
 GLY 124HIS 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 3HGK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
77 88Right-handed alpha
Helix 2
2
A
105 109Right-handed 310
Helix 3
3
A
122 126Right-handed 310
Helix 4
4
A
138 158Right-handed alpha
Helix 5
5
A
166 170Right-handed 310
Helix 6
6
A
209 216Right-handed alpha
Helix 7
7
A
221 236Right-handed alpha
Helix 8
8
A
251 261Right-handed alpha
Helix 9
9
A
278 293Right-handed alpha
Helix 10
10
A
296 300Right-handed 310
Helix 11
11
A
302 318Right-handed alpha
Helix 12
12
B
79 91Right-handed alpha
Helix 13
13
B
105 109Right-handed 310
Helix 14
14
B
122 127Right-handed alpha
Helix 15
15
B
137 157Right-handed alpha
Helix 16
16
B
166 168Right-handed 310
Helix 17
17
B
209 216Right-handed alpha
Helix 18
18
B
221 237Right-handed alpha
Helix 19
19
B
251 260Right-handed alpha
Helix 20
20
B
278 294Right-handed alpha
Helix 21
21
B
296 300Right-handed 310
Helix 22
22
B
302 319Right-handed alpha
Helix 23
23
C
77 91Right-handed alpha
Helix 24
24
C
105 109Right-handed 310
Helix 25
25
C
122 127Right-handed alpha
Helix 26
26
C
137 157Right-handed alpha
Helix 27
27
C
166 168Right-handed 310
Helix 28
28
C
209 216Right-handed alpha
Helix 29
29
C
221 237Right-handed alpha
Helix 30
30
C
251 261Right-handed alpha
Helix 31
31
C
278 293Right-handed alpha
Helix 32
32
C
296 300Right-handed 310
Helix 33
33
C
302 318Right-handed alpha
Helix 34
34
D
77 88Right-handed alpha
Helix 35
35
D
105 109Right-handed 310
Helix 36
36
D
122 127Right-handed alpha
Helix 37
37
D
137 158Right-handed alpha
Helix 38
38
D
209 216Right-handed alpha
Helix 39
39
D
220 236Right-handed alpha
Helix 40
40
D
251 261Right-handed alpha
Helix 41
41
D
278 292Right-handed alpha
Helix 42
42
D
296 300Right-handed 310
Helix 43
43
D
302 316Right-handed alpha
Helix 44
44
E
125 139Right-handed alpha
Helix 45
45
E
142 156Right-handed alpha
Helix 46
46
E
162 173Right-handed alpha
Helix 47
47
E
185 200Right-handed alpha
Helix 48
48
F
125 139Right-handed alpha
Helix 49
49
F
142 156Right-handed alpha
Helix 50
50
F
162 173Right-handed alpha
Helix 51
51
F
185 200Right-handed alpha
Helix 52
52
G
125 139Right-handed alpha
Helix 53
53
G
142 156Right-handed alpha
Helix 54
54
G
162 173Right-handed alpha
Helix 55
55
G
185 200Right-handed alpha
Helix 56
56
H
125 139Right-handed alpha
Helix 57
57
H
142 156Right-handed alpha
Helix 58
58
H
162 173Right-handed alpha
Helix 59
59
H
185 200Right-handed alpha
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There are 16 sheets in PDB entry 3HGK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
53 54anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
65 68anti-parallel
Strand 3
A
111 115anti-parallel
Strand 4
A
100 104anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
A
187 188anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
53 55anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 69first strand
Strand 2
B
111 115anti-parallel
Strand 3
B
100 104anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 161first strand
Strand 2
B
187 188anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 172first strand
Strand 2
B
178 180anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
196 197first strand
Strand 2
B
218 219anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 204first strand
Strand 2
E
158 159anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 50first strand
Strand 2
C
53 59anti-parallel
Strand 3
C
65 70anti-parallel
Strand 4
C
111 115anti-parallel
Strand 5
C
100 104anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 161first strand
Strand 2
C
187 188anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 172first strand
Strand 2
C
178 180anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
196 197first strand
Strand 2
C
218 219anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
203 204first strand
Strand 2
G
158 159anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 50first strand
Strand 2
D
53 59anti-parallel
Strand 3
D
65 70anti-parallel
Strand 4
D
112 115anti-parallel
Strand 5
D
100 103anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
170 172first strand
Strand 2
D
178 180anti-parallel
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