Analysis of interatomic Contacts of Structural Units in PDB entry:
3HHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HHW entry

There are 10 chains in PDB entry 3HHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 193LEU 265
B
 ALA 193LEU 265
C
 ALA 193LEU 265
D
 ALA 193LEU 265
E
 ALA 193LEU 265
K
 SER 2LYS 422
L
 SER 2LYS 422
M
 SER 2LYS 422
N
 SER 2LYS 422
O
 SER 2LYS 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are129 helices in PDB entry 3HHW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
195 201Right-handed 310
Helix 2
2
A
221 225Right-handed alpha
Helix 3
3
A
228 235Right-handed alpha
Helix 4
4
A
241 250Right-handed alpha
Helix 5
5
A
255 263Right-handed alpha
Helix 6
6
B
197 201Right-handed 310
Helix 7
7
B
231 236Right-handed alpha
Helix 8
8
B
241 248Right-handed alpha
Helix 9
9
B
255 263Right-handed alpha
Helix 10
10
C
195 203Right-handed 310
Helix 11
11
C
220 225Right-handed alpha
Helix 12
12
C
228 235Right-handed alpha
Helix 13
13
C
241 250Right-handed alpha
Helix 14
14
C
256 263Right-handed alpha
Helix 15
15
D
197 201Right-handed 310
Helix 16
16
D
221 225Right-handed alpha
Helix 17
17
D
241 250Right-handed alpha
Helix 18
18
D
256 263Right-handed alpha
Helix 19
19
E
197 201Right-handed 310
Helix 20
20
E
222 224Right-handed 310
Helix 21
21
E
228 235Right-handed alpha
Helix 22
22
E
241 248Right-handed alpha
Helix 23
23
E
257 263Right-handed alpha
Helix 24
24
K
27 31Right-handed 310
Helix 25
25
K
47 61Right-handed alpha
Helix 26
26
K
65 78Right-handed alpha
Helix 27
27
K
129 145Right-handed alpha
Helix 28
28
K
153 158Right-handed alpha
Helix 29
29
K
160 167Right-handed alpha
Helix 30
30
K
177 182Right-handed alpha
Helix 31
31
K
183 187Right-handed 310
Helix 32
32
K
188 205Right-handed alpha
Helix 33
33
K
210 216Right-handed 310
Helix 34
34
K
217 221Right-handed 310
Helix 35
35
K
225 239Right-handed alpha
Helix 36
36
K
241 248Right-handed alpha
Helix 37
37
K
251 262Right-handed alpha
Helix 38
38
K
274 278Right-handed 310
Helix 39
39
K
290 293Right-handed 310
Helix 40
40
K
294 308Right-handed alpha
Helix 41
41
K
312 316Right-handed 310
Helix 42
42
K
323 341Right-handed alpha
Helix 43
43
K
374 385Right-handed alpha
Helix 44
44
K
390 402Right-handed alpha
Helix 45
45
K
411 421Right-handed alpha
Helix 46
46
L
27 32Right-handed alpha
Helix 47
47
L
47 59Right-handed alpha
Helix 48
48
L
65 77Right-handed alpha
Helix 49
49
L
133 140Right-handed alpha
Helix 50
50
L
143 147Right-handed 310
Helix 51
51
L
151 160Right-handed alpha
Helix 52
52
L
162 166Right-handed 310
Helix 53
53
L
182 187Right-handed 310
Helix 54
54
L
188 205Right-handed alpha
Helix 55
55
L
210 212Right-handed 310
Helix 56
56
L
213 218Right-handed alpha
Helix 57
57
L
219 221Right-handed 310
Helix 58
58
L
225 239Right-handed alpha
Helix 59
59
L
241 248Right-handed alpha
Helix 60
60
L
251 262Right-handed alpha
Helix 61
61
L
274 278Right-handed 310
Helix 62
62
L
290 293Right-handed 310
Helix 63
63
L
294 308Right-handed alpha
Helix 64
64
L
312 316Right-handed 310
Helix 65
65
L
323 341Right-handed alpha
Helix 66
66
L
374 385Right-handed alpha
Helix 67
67
L
390 402Right-handed alpha
Helix 68
68
L
411 421Right-handed alpha
Helix 69
69
M
27 34Right-handed 310
Helix 70
70
M
47 61Right-handed alpha
Helix 71
71
M
65 78Right-handed alpha
Helix 72
72
M
133 145Right-handed alpha
Helix 73
73
M
151 156Right-handed alpha
Helix 74
74
M
162 166Right-handed 310
Helix 75
75
M
179 184Right-handed alpha
Helix 76
76
M
185 187Right-handed 310
Helix 77
77
M
188 205Right-handed alpha
Helix 78
78
M
210 212Right-handed 310
Helix 79
79
M
213 218Right-handed alpha
Helix 80
80
M
219 221Right-handed 310
Helix 81
81
M
225 239Right-handed alpha
Helix 82
82
M
241 248Right-handed alpha
Helix 83
83
M
251 262Right-handed alpha
Helix 84
84
M
274 278Right-handed 310
Helix 85
85
M
294 308Right-handed alpha
Helix 86
86
M
312 316Right-handed 310
Helix 87
87
M
323 341Right-handed alpha
Helix 88
88
M
374 385Right-handed alpha
Helix 89
89
M
390 402Right-handed alpha
Helix 90
90
M
411 421Right-handed alpha
Helix 91
91
N
28 33Right-handed alpha
Helix 92
92
N
47 62Right-handed alpha
Helix 93
93
N
65 76Right-handed alpha
Helix 94
94
N
133 147Right-handed alpha
Helix 95
95
N
184 187Right-handed 310
Helix 96
96
N
188 205Right-handed alpha
Helix 97
97
N
210 215Right-handed 310
Helix 98
98
N
217 221Right-handed 310
Helix 99
99
N
225 239Right-handed alpha
Helix 100
100
N
241 247Right-handed alpha
Helix 101
101
N
251 262Right-handed alpha
Helix 102
102
N
274 278Right-handed 310
Helix 103
103
N
294 308Right-handed alpha
Helix 104
104
N
323 341Right-handed alpha
Helix 105
105
N
374 385Right-handed alpha
Helix 106
106
N
390 402Right-handed alpha
Helix 107
107
N
411 421Right-handed alpha
Helix 108
108
O
27 34Right-handed 310
Helix 109
109
O
47 59Right-handed alpha
Helix 110
110
O
65 78Right-handed alpha
Helix 111
111
O
133 140Right-handed alpha
Helix 112
112
O
141 142Right-handed 310
Helix 113
113
O
143 147Right-handed 310
Helix 114
114
O
151 156Right-handed alpha
Helix 115
115
O
158 163Right-handed alpha
Helix 116
116
O
184 187Right-handed 310
Helix 117
117
O
188 205Right-handed alpha
Helix 118
118
O
208 216Right-handed 310
Helix 119
119
O
217 221Right-handed 310
Helix 120
120
O
225 239Right-handed alpha
Helix 121
121
O
241 247Right-handed alpha
Helix 122
122
O
251 262Right-handed alpha
Helix 123
123
O
274 278Right-handed 310
Helix 124
124
O
294 308Right-handed alpha
Helix 125
125
O
312 316Right-handed 310
Helix 126
126
O
323 341Right-handed alpha
Helix 127
127
O
374 384Right-handed alpha
Helix 128
128
O
390 402Right-handed alpha
Helix 129
129
O
411 421Right-handed alpha
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There are 23 sheets in PDB entry 3HHW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 207first strand
Strand 2
A
217 220anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 207first strand
Strand 2
B
217 219anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 207first strand
Strand 2
C
217 219anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
204 207first strand
Strand 2
D
217 220anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
204 207first strand
Strand 2
E
217 220anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
13 14first strand
Strand 2
K
5 7anti-parallel
Strand 3
M
348 349anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
40 42first strand
Strand 2
K
109 111parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
81 83first strand
Strand 2
K
101 103anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
88 90first strand
Strand 2
K
93 96anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
13 14first strand
Strand 2
L
5 7anti-parallel
Strand 3
N
348 349anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
40 41first strand
Strand 2
L
109 110parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
81 83first strand
Strand 2
L
101 103anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
88 90first strand
Strand 2
L
93 96anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
348 349first strand
Strand 2
O
5 7anti-parallel
Strand 3
O
13 14anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
5 6first strand
Strand 2
M
13 14anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
40 41first strand
Strand 2
M
109 110parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
81 83first strand
Strand 2
M
101 103anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
88 90first strand
Strand 2
M
93 96anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
5 7first strand
Strand 2
N
12 14anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
88 89first strand
Strand 2
N
94 96anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
40 41first strand
Strand 2
O
109 110parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
81 83first strand
Strand 2
O
101 103anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
88 90first strand
Strand 2
O
93 96anti-parallel
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