Analysis of interatomic Contacts of Structural Units in PDB entry:
3HID


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HID entry

There is 1 chain in PDB entry 3HID (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3HID. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
76 90Right-handed alpha
Helix 3
3
A
93 97Right-handed alpha
Helix 4
4
A
108 121Right-handed alpha
Helix 5
5
A
133 143Right-handed alpha
Helix 6
6
A
148 153Right-handed 310
Helix 7
7
A
154 176Right-handed alpha
Helix 8
8
A
183 200Right-handed alpha
Helix 9
9
A
204 215Right-handed alpha
Helix 10
10
A
226 230Right-handed 310
Helix 11
11
A
245 247Right-handed 310
Helix 12
12
A
248 254Right-handed alpha
Helix 13
13
A
256 260Right-handed 310
Helix 14
14
A
285 295Right-handed alpha
Helix 15
15
A
313 324Right-handed alpha
Helix 16
16
A
332 337Right-handed 310
Helix 17
17
A
388 392Right-handed 310
Helix 18
18
A
393 408Right-handed alpha
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There are 4 sheets in PDB entry 3HID. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
66 69parallel
Strand 3
A
30 33parallel
Strand 4
A
219 222parallel
Strand 5
A
5 9parallel
Strand 6
A
262 268parallel
Strand 7
A
327 331parallel
Strand 8
A
411 415parallel
Strand 9
A
423 425anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 46first strand
Strand 2
A
49 53anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
307 312anti-parallel
Strand 3
A
341 349parallel
Strand 4
A
355 356anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
307 312anti-parallel
Strand 3
A
341 349parallel
Strand 4
A
370 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il