Analysis of interatomic Contacts of Structural Units in PDB entry:
3HIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HIE entry

There are 4 chains in PDB entry 3HIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 75ASP 239
B
 ASN 76ASP 239
C
 LEU 78ARG 241
D
 ASN 76ARG 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3HIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 94Right-handed alpha
Helix 2
2
A
130 132Right-handed 310
Helix 3
3
A
173 175Right-handed 310
Helix 4
4
A
202 220Right-handed alpha
Helix 5
5
B
76 94Right-handed alpha
Helix 6
6
B
130 132Right-handed 310
Helix 7
7
B
173 175Right-handed 310
Helix 8
8
B
202 220Right-handed alpha
Helix 9
9
C
78 94Right-handed alpha
Helix 10
10
C
130 132Right-handed 310
Helix 11
11
C
173 175Right-handed 310
Helix 12
12
C
202 220Right-handed alpha
Helix 13
13
C
225 227Right-handed 310
Helix 14
14
D
76 94Right-handed alpha
Helix 15
15
D
130 132Right-handed 310
Helix 16
16
D
173 175Right-handed 310
Helix 17
17
D
202 220Right-handed alpha
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There are 7 sheets in PDB entry 3HIE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 117first strand
Strand 2
A
134 143anti-parallel
Strand 3
A
151 158anti-parallel
Strand 4
A
164 171anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 199first strand
Strand 2
A
187 191anti-parallel
Strand 3
A
177 180anti-parallel
Strand 4
B
235 238anti-parallel
Strand 5
A
229 231anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 199first strand
Strand 2
B
187 191anti-parallel
Strand 3
B
177 180anti-parallel
Strand 4
A
235 238anti-parallel
Strand 5
B
229 231anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
107 117first strand
Strand 2
B
134 144anti-parallel
Strand 3
B
147 158anti-parallel
Strand 4
B
164 171anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
107 117first strand
Strand 2
C
134 144anti-parallel
Strand 3
C
147 158anti-parallel
Strand 4
C
164 171anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 199first strand
Strand 2
C
187 191anti-parallel
Strand 3
C
177 180anti-parallel
Strand 4
D
235 238anti-parallel
Strand 5
C
229 231anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
164 171first strand
Strand 2
D
147 158anti-parallel
Strand 3
D
134 144anti-parallel
Strand 4
D
107 117anti-parallel
Strand 5
D
195 200anti-parallel
Strand 6
D
187 191anti-parallel
Strand 7
D
177 180anti-parallel
Strand 8
C
235 238anti-parallel
Strand 9
D
229 231anti-parallel
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