Analysis of interatomic Contacts of Structural Units in PDB entry:
3HIF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HIF entry

There are 6 chains in PDB entry 3HIF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7GLY 207
B
 THR 7GLY 207
C
 THR 7GLY 207
D
 THR 7GLY 207
E
 THR 7GLY 207
F
 THR 7GLY 207
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3HIF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 14Right-handed alpha
Helix 2
2
A
98 109Right-handed alpha
Helix 3
3
A
110 129Right-handed alpha
Helix 4
4
A
133 151Right-handed alpha
Helix 5
5
A
168 177Right-handed alpha
Helix 6
6
A
179 193Right-handed alpha
Helix 7
7
B
8 16Right-handed alpha
Helix 8
8
B
98 109Right-handed alpha
Helix 9
9
B
110 125Right-handed alpha
Helix 10
10
B
133 151Right-handed alpha
Helix 11
11
B
168 177Right-handed alpha
Helix 12
12
B
179 193Right-handed alpha
Helix 13
13
C
10 14Right-handed 310
Helix 14
14
C
74 78Right-handed 310
Helix 15
15
C
104 109Right-handed alpha
Helix 16
16
C
110 129Right-handed alpha
Helix 17
17
C
133 152Right-handed alpha
Helix 18
18
C
168 177Right-handed alpha
Helix 19
19
C
179 193Right-handed alpha
Helix 20
20
D
8 17Right-handed alpha
Helix 21
21
D
98 109Right-handed alpha
Helix 22
22
D
110 129Right-handed alpha
Helix 23
23
D
133 152Right-handed alpha
Helix 24
24
D
168 177Right-handed alpha
Helix 25
25
D
179 193Right-handed alpha
Helix 26
26
E
10 16Right-handed alpha
Helix 27
27
E
71 76Right-handed 310
Helix 28
28
E
98 109Right-handed alpha
Helix 29
29
E
110 129Right-handed alpha
Helix 30
30
E
133 152Right-handed alpha
Helix 31
31
E
168 177Right-handed alpha
Helix 32
32
E
179 193Right-handed alpha
Helix 33
33
F
10 15Right-handed alpha
Helix 34
34
F
73 78Right-handed alpha
Helix 35
35
F
98 109Right-handed alpha
Helix 36
36
F
110 126Right-handed alpha
Helix 37
37
F
127 129Right-handed 310
Helix 38
38
F
133 151Right-handed alpha
Helix 39
39
F
168 177Right-handed alpha
Helix 40
40
F
179 193Right-handed alpha
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There are 18 sheets in PDB entry 3HIF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
92 96anti-parallel
Strand 3
A
40 44anti-parallel
Strand 4
A
68 69anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
86 88anti-parallel
Strand 3
A
46 48anti-parallel
Strand 4
A
64 65anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 159first strand
Strand 2
A
162 166anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
196 199anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 23first strand
Strand 2
B
92 96anti-parallel
Strand 3
B
40 42anti-parallel
Strand 4
B
69 70anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 64first strand
Strand 2
B
47 52anti-parallel
Strand 3
B
85 88anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
157 159first strand
Strand 2
B
162 166anti-parallel
Strand 3
B
202 206anti-parallel
Strand 4
B
196 199anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 23first strand
Strand 2
C
92 96anti-parallel
Strand 3
C
41 44anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 65first strand
Strand 2
C
46 52anti-parallel
Strand 3
C
85 88anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 159first strand
Strand 2
C
162 166anti-parallel
Strand 3
C
202 206anti-parallel
Strand 4
C
196 199anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 23first strand
Strand 2
D
92 96anti-parallel
Strand 3
D
40 44anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 65first strand
Strand 2
D
46 52anti-parallel
Strand 3
D
86 88anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
157 158first strand
Strand 2
D
162 166anti-parallel
Strand 3
D
202 206anti-parallel
Strand 4
D
196 199anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 23first strand
Strand 2
E
92 96anti-parallel
Strand 3
E
40 42anti-parallel
Strand 4
E
68 70anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
28 30first strand
Strand 2
E
86 88anti-parallel
Strand 3
E
47 52anti-parallel
Strand 4
E
58 62anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
157 159first strand
Strand 2
E
162 166anti-parallel
Strand 3
E
202 204anti-parallel
Strand 4
E
197 199anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 20first strand
Strand 2
F
94 96anti-parallel
Strand 3
F
40 42anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
62 64first strand
Strand 2
F
47 49anti-parallel
Strand 3
F
86 88anti-parallel
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There are 4 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
157 158first strand
Strand 2
F
162 166anti-parallel
Strand 3
F
202 206anti-parallel
Strand 4
F
196 199anti-parallel
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