Analysis of interatomic Contacts of Structural Units in PDB entry:
3HJ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HJ4 entry

There are 2 chains in PDB entry 3HJ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3THR 383
B
 VAL 3PRO 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 3HJ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 20Right-handed alpha
Helix 2
2
A
24 44Right-handed alpha
Helix 3
3
A
53 58Right-handed alpha
Helix 4
4
A
76 80Right-handed 310
Helix 5
5
A
82 104Right-handed alpha
Helix 6
6
A
135 151Right-handed alpha
Helix 7
7
A
152 170Right-handed alpha
Helix 8
8
A
174 178Right-handed 310
Helix 9
9
A
181 196Right-handed alpha
Helix 10
10
A
213 222Right-handed alpha
Helix 11
11
A
227 233Right-handed 310
Helix 12
12
A
236 258Right-handed alpha
Helix 13
13
A
273 303Right-handed alpha
Helix 14
14
A
304 307Right-handed 310
Helix 15
15
A
310 324Right-handed alpha
Helix 16
16
A
347 349Right-handed 310
Helix 17
17
A
350 366Right-handed alpha
Helix 18
18
A
368 372Right-handed 310
Helix 19
19
A
373 378Right-handed alpha
Helix 20
20
B
3 20Right-handed alpha
Helix 21
21
B
24 44Right-handed alpha
Helix 22
22
B
53 58Right-handed alpha
Helix 23
23
B
82 104Right-handed alpha
Helix 24
24
B
135 151Right-handed alpha
Helix 25
25
B
152 170Right-handed alpha
Helix 26
26
B
174 178Right-handed 310
Helix 27
27
B
181 196Right-handed alpha
Helix 28
28
B
213 224Right-handed alpha
Helix 29
29
B
227 233Right-handed 310
Helix 30
30
B
236 258Right-handed alpha
Helix 31
31
B
273 303Right-handed alpha
Helix 32
32
B
304 307Right-handed 310
Helix 33
33
B
310 324Right-handed alpha
Helix 34
34
B
347 349Right-handed 310
Helix 35
35
B
350 367Right-handed alpha
Helix 36
36
B
368 372Right-handed 310
Helix 37
37
B
373 378Right-handed alpha
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There are 2 sheets in PDB entry 3HJ4. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
66 71anti-parallel
Strand 3
A
128 133parallel
Strand 4
A
117 121anti-parallel
Strand 5
A
106 111anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
66 71anti-parallel
Strand 3
B
128 133parallel
Strand 4
B
117 121anti-parallel
Strand 5
B
106 111anti-parallel
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