Analysis of interatomic Contacts of Structural Units in PDB entry:
3HJ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HJ6 entry

There are 2 chains in PDB entry 3HJ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 22ILE 306
B
 LEU 22ILE 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3HJ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 46Right-handed 310
Helix 2
2
A
55 67Right-handed alpha
Helix 3
3
A
80 93Right-handed alpha
Helix 4
4
A
127 132Right-handed 310
Helix 5
5
A
137 143Right-handed alpha
Helix 6
6
A
152 157Right-handed alpha
Helix 7
7
A
157 174Right-handed alpha
Helix 8
8
A
185 189Right-handed 310
Helix 9
9
A
195 204Right-handed alpha
Helix 10
10
A
212 221Right-handed alpha
Helix 11
11
A
226 233Right-handed 310
Helix 12
12
A
273 284Right-handed alpha
Helix 13
13
A
291 300Right-handed alpha
Helix 14
14
B
42 46Right-handed 310
Helix 15
15
B
55 67Right-handed alpha
Helix 16
16
B
80 93Right-handed alpha
Helix 17
17
B
127 132Right-handed 310
Helix 18
18
B
137 143Right-handed alpha
Helix 19
19
B
152 157Right-handed alpha
Helix 20
20
B
157 174Right-handed alpha
Helix 21
21
B
185 189Right-handed 310
Helix 22
22
B
195 204Right-handed alpha
Helix 23
23
B
212 221Right-handed alpha
Helix 24
24
B
226 233Right-handed 310
Helix 25
25
B
273 284Right-handed alpha
Helix 26
26
B
291 300Right-handed alpha
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There are 5 sheets in PDB entry 3HJ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 74first strand
Strand 2
A
24 27parallel
Strand 3
A
147 151parallel
Strand 4
A
177 181parallel
Strand 5
A
208 209parallel
Strand 6
A
239 243parallel
Strand 7
A
249 252anti-parallel
Strand 8
A
257 259anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 125first strand
Strand 2
A
110 113anti-parallel
Strand 3
A
31 35parallel
Strand 4
A
48 54anti-parallel
Strand 5
B
48 54anti-parallel
Strand 6
B
31 35anti-parallel
Strand 7
B
110 113parallel
Strand 8
B
122 125anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 78first strand
Strand 2
A
101 103parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 74first strand
Strand 2
B
24 27parallel
Strand 3
B
147 151parallel
Strand 4
B
177 181parallel
Strand 5
B
208 209parallel
Strand 6
B
239 243parallel
Strand 7
B
249 252anti-parallel
Strand 8
B
257 259anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 78first strand
Strand 2
B
101 103parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il