Analysis of interatomic Contacts of Structural Units in PDB entry:
3HJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HJB entry

There are 4 chains in PDB entry 3HJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ALA 550
B
 ALA 0ALA 550
C
 ALA 0ALA 550
D
 ALA 0ALA 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are140 helices in PDB entry 3HJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 9Right-handed 310
Helix 2
2
A
10 24Right-handed alpha
Helix 3
3
A
27 34Right-handed alpha
Helix 4
4
A
37 42Right-handed alpha
Helix 5
5
A
60 74Right-handed alpha
Helix 6
6
A
75 86Right-handed alpha
Helix 7
7
A
98 103Right-handed alpha
Helix 8
8
A
117 138Right-handed alpha
Helix 9
9
A
156 159Right-handed 310
Helix 10
10
A
160 170Right-handed alpha
Helix 11
11
A
171 174Right-handed 310
Helix 12
12
A
186 195Right-handed alpha
Helix 13
13
A
196 197Right-handed 310
Helix 14
14
A
198 200Right-handed 310
Helix 15
15
A
213 232Right-handed alpha
Helix 16
16
A
233 239Right-handed 310
Helix 17
17
A
247 255Right-handed alpha
Helix 18
18
A
257 259Right-handed 310
Helix 19
19
A
269 273Right-handed 310
Helix 20
20
A
276 278Right-handed 310
Helix 21
21
A
279 287Right-handed alpha
Helix 22
22
A
287 308Right-handed alpha
Helix 23
23
A
309 312Right-handed 310
Helix 24
24
A
313 328Right-handed alpha
Helix 25
25
A
340 344Right-handed 310
Helix 26
26
A
345 359Right-handed alpha
Helix 27
27
A
385 396Right-handed alpha
Helix 28
28
A
416 435Right-handed alpha
Helix 29
29
A
437 448Right-handed alpha
Helix 30
30
A
451 463Right-handed alpha
Helix 31
31
A
479 501Right-handed alpha
Helix 32
32
A
508 510Right-handed 310
Helix 33
33
A
511 522Right-handed alpha
Helix 34
34
A
523 526Right-handed 310
Helix 35
35
A
535 550Right-handed alpha
Helix 36
36
B
6 9Right-handed 310
Helix 37
37
B
10 24Right-handed alpha
Helix 38
38
B
27 34Right-handed alpha
Helix 39
39
B
37 42Right-handed alpha
Helix 40
40
B
60 74Right-handed alpha
Helix 41
41
B
75 86Right-handed alpha
Helix 42
42
B
98 103Right-handed alpha
Helix 43
43
B
117 137Right-handed alpha
Helix 44
44
B
156 159Right-handed 310
Helix 45
45
B
160 170Right-handed alpha
Helix 46
46
B
171 174Right-handed 310
Helix 47
47
B
186 195Right-handed alpha
Helix 48
48
B
196 197Right-handed 310
Helix 49
49
B
198 200Right-handed 310
Helix 50
50
B
213 232Right-handed alpha
Helix 51
51
B
233 239Right-handed 310
Helix 52
52
B
247 255Right-handed alpha
Helix 53
53
B
257 259Right-handed 310
Helix 54
54
B
269 273Right-handed 310
Helix 55
55
B
276 278Right-handed 310
Helix 56
56
B
279 287Right-handed alpha
Helix 57
57
B
287 308Right-handed alpha
Helix 58
58
B
309 312Right-handed 310
Helix 59
59
B
313 328Right-handed alpha
Helix 60
60
B
340 344Right-handed 310
Helix 61
61
B
345 359Right-handed alpha
Helix 62
62
B
385 396Right-handed alpha
Helix 63
63
B
416 435Right-handed alpha
Helix 64
64
B
437 448Right-handed alpha
Helix 65
65
B
451 463Right-handed alpha
Helix 66
66
B
479 501Right-handed alpha
Helix 67
67
B
508 510Right-handed 310
Helix 68
68
B
511 522Right-handed alpha
Helix 69
69
B
523 526Right-handed 310
Helix 70
70
B
535 550Right-handed alpha
Helix 71
71
C
6 9Right-handed 310
Helix 72
72
C
10 24Right-handed alpha
Helix 73
73
C
27 34Right-handed alpha
Helix 74
74
C
37 42Right-handed alpha
Helix 75
75
C
60 74Right-handed alpha
Helix 76
76
C
75 86Right-handed alpha
Helix 77
77
C
98 103Right-handed alpha
Helix 78
78
C
117 137Right-handed alpha
Helix 79
79
C
156 159Right-handed 310
Helix 80
80
C
160 170Right-handed alpha
Helix 81
81
C
171 174Right-handed 310
Helix 82
82
C
186 195Right-handed alpha
Helix 83
83
C
196 197Right-handed 310
Helix 84
84
C
198 200Right-handed 310
Helix 85
85
C
213 232Right-handed alpha
Helix 86
86
C
233 239Right-handed 310
Helix 87
87
C
247 255Right-handed alpha
Helix 88
88
C
257 259Right-handed 310
Helix 89
89
C
269 273Right-handed 310
Helix 90
90
C
276 278Right-handed 310
Helix 91
91
C
279 287Right-handed alpha
Helix 92
92
C
287 308Right-handed alpha
Helix 93
93
C
309 312Right-handed 310
Helix 94
94
C
313 328Right-handed alpha
Helix 95
95
C
340 344Right-handed 310
Helix 96
96
C
345 359Right-handed alpha
Helix 97
97
C
385 396Right-handed alpha
Helix 98
98
C
416 435Right-handed alpha
Helix 99
99
C
437 448Right-handed alpha
Helix 100
100
C
451 463Right-handed alpha
Helix 101
101
C
479 501Right-handed alpha
Helix 102
102
C
508 510Right-handed 310
Helix 103
103
C
511 522Right-handed alpha
Helix 104
104
C
523 526Right-handed 310
Helix 105
105
C
535 550Right-handed alpha
Helix 106
106
D
6 9Right-handed 310
Helix 107
107
D
10 24Right-handed alpha
Helix 108
108
D
27 35Right-handed alpha
Helix 109
109
D
37 42Right-handed alpha
Helix 110
110
D
60 74Right-handed alpha
Helix 111
111
D
75 86Right-handed alpha
Helix 112
112
D
98 103Right-handed alpha
Helix 113
113
D
117 138Right-handed alpha
Helix 114
114
D
156 159Right-handed 310
Helix 115
115
D
160 170Right-handed alpha
Helix 116
116
D
171 174Right-handed 310
Helix 117
117
D
186 195Right-handed alpha
Helix 118
118
D
196 197Right-handed 310
Helix 119
119
D
198 200Right-handed 310
Helix 120
120
D
213 232Right-handed alpha
Helix 121
121
D
233 239Right-handed 310
Helix 122
122
D
247 255Right-handed alpha
Helix 123
123
D
257 259Right-handed 310
Helix 124
124
D
269 273Right-handed 310
Helix 125
125
D
276 278Right-handed 310
Helix 126
126
D
279 287Right-handed alpha
Helix 127
127
D
287 308Right-handed alpha
Helix 128
128
D
309 312Right-handed 310
Helix 129
129
D
313 328Right-handed alpha
Helix 130
130
D
340 344Right-handed 310
Helix 131
131
D
345 359Right-handed alpha
Helix 132
132
D
385 396Right-handed alpha
Helix 133
133
D
416 435Right-handed alpha
Helix 134
134
D
437 448Right-handed alpha
Helix 135
135
D
451 463Right-handed alpha
Helix 136
136
D
479 501Right-handed alpha
Helix 137
137
D
508 510Right-handed 310
Helix 138
138
D
511 522Right-handed alpha
Helix 139
139
D
523 526Right-handed 310
Helix 140
140
D
535 550Right-handed alpha
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There are 12 sheets in PDB entry 3HJB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
50 53anti-parallel
Strand 3
A
470 475anti-parallel
Strand 4
A
402 407parallel
Strand 5
A
333 338parallel
Strand 6
A
376 378parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
115 116anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 182first strand
Strand 2
A
150 154parallel
Strand 3
A
202 207parallel
Strand 4
A
241 244parallel
Strand 5
A
261 262parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
50 53anti-parallel
Strand 3
B
470 475anti-parallel
Strand 4
B
402 407parallel
Strand 5
B
333 338parallel
Strand 6
B
376 378parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
115 116anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 182first strand
Strand 2
B
150 154parallel
Strand 3
B
202 207parallel
Strand 4
B
241 244parallel
Strand 5
B
261 262parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 46first strand
Strand 2
C
50 53anti-parallel
Strand 3
C
470 475anti-parallel
Strand 4
C
402 407parallel
Strand 5
C
333 338parallel
Strand 6
C
376 378parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 112first strand
Strand 2
C
115 116anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 182first strand
Strand 2
C
150 154parallel
Strand 3
C
202 207parallel
Strand 4
C
241 244parallel
Strand 5
C
261 262parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 46first strand
Strand 2
D
50 53anti-parallel
Strand 3
D
470 475anti-parallel
Strand 4
D
402 407parallel
Strand 5
D
333 338parallel
Strand 6
D
376 378parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 112first strand
Strand 2
D
115 116anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
178 182first strand
Strand 2
D
150 154parallel
Strand 3
D
202 207parallel
Strand 4
D
241 244parallel
Strand 5
D
261 262parallel
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