Analysis of interatomic Contacts of Structural Units in PDB entry:
3HK0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HK0 entry

There are 2 chains in PDB entry 3HK0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 109ILE 351
B
 GLN 110ARG 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3HK0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
131 141Right-handed alpha
Helix 2
2
A
171 178Right-handed alpha
Helix 3
3
A
194 199Right-handed alpha
Helix 4
4
A
200 203Right-handed 310
Helix 5
5
A
222 228Right-handed alpha
Helix 6
6
A
271 273Right-handed 310
Helix 7
7
A
292 297Right-handed alpha
Helix 8
8
A
325 342Right-handed alpha
Helix 9
9
A
342 350Right-handed alpha
Helix 10
10
B
131 141Right-handed alpha
Helix 11
11
B
171 178Right-handed alpha
Helix 12
12
B
194 199Right-handed alpha
Helix 13
13
B
222 228Right-handed alpha
Helix 14
14
B
325 342Right-handed alpha
Helix 15
15
B
342 350Right-handed alpha
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There are 4 sheets in PDB entry 3HK0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
A
110 116anti-parallel
Strand 3
A
184 189parallel
Strand 4
A
151 157anti-parallel
Strand 5
A
162 165anti-parallel
Strand 6
A
284 289anti-parallel
Strand 7
A
302 308anti-parallel
Strand 8
A
319 323anti-parallel
Strand 9
A
233 242anti-parallel
Strand 10
A
209 211anti-parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 126first strand
Strand 2
A
110 116anti-parallel
Strand 3
A
184 189parallel
Strand 4
A
151 157anti-parallel
Strand 5
A
162 165anti-parallel
Strand 6
A
284 289anti-parallel
Strand 7
A
302 308anti-parallel
Strand 8
A
319 323anti-parallel
Strand 9
A
233 242anti-parallel
Strand 10
A
249 257anti-parallel
Strand 11
A
260 264anti-parallel
Strand 12
A
275 279anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 125first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
184 189parallel
Strand 4
B
151 157anti-parallel
Strand 5
B
162 165anti-parallel
Strand 6
B
284 289anti-parallel
Strand 7
B
303 308anti-parallel
Strand 8
B
320 322anti-parallel
Strand 9
B
234 242anti-parallel
Strand 10
B
209 210anti-parallel
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There are 12 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 125first strand
Strand 2
B
111 116anti-parallel
Strand 3
B
184 189parallel
Strand 4
B
151 157anti-parallel
Strand 5
B
162 165anti-parallel
Strand 6
B
284 289anti-parallel
Strand 7
B
303 308anti-parallel
Strand 8
B
320 322anti-parallel
Strand 9
B
234 242anti-parallel
Strand 10
B
249 257anti-parallel
Strand 11
B
260 263anti-parallel
Strand 12
B
276 279anti-parallel
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