Analysis of interatomic Contacts of Structural Units in PDB entry:
3HL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HL3 entry

There is 1 chain in PDB entry 3HL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLU 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 3HL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 15Right-handed 310
Helix 2
2
A
22 25Right-handed 310
Helix 3
3
A
33 43Right-handed alpha
Helix 4
4
A
57 66Right-handed alpha
Helix 5
5
A
68 72Right-handed 310
Helix 6
6
A
85 92Right-handed alpha
Helix 7
7
A
93 98Right-handed alpha
Helix 8
8
A
115 124Right-handed alpha
Helix 9
9
A
138 141Right-handed 310
Helix 10
10
A
176 184Right-handed alpha
Helix 11
11
A
188 193Right-handed alpha
Helix 12
12
A
194 205Right-handed alpha
Helix 13
13
A
222 234Right-handed alpha
Helix 14
14
A
239 244Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3HL3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 80first strand
Strand 2
A
48 54parallel
Strand 3
A
1 6parallel
Strand 4
A
101 106parallel
Strand 5
A
166 174anti-parallel
Strand 6
A
143 148anti-parallel
Strand 7
A
151 157anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 80first strand
Strand 2
A
48 54parallel
Strand 3
A
1 6parallel
Strand 4
A
101 106parallel
Strand 5
A
166 174anti-parallel
Strand 6
A
129 135anti-parallel
Strand 7
A
208 212parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
31 32anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 111first strand
Strand 2
A
217 219anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il