Analysis of interatomic Contacts of Structural Units in PDB entry:
3HLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HLP entry

There are 2 chains in PDB entry 3HLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3VAL 305
B
 SER 3VAL 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3HLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 29Right-handed alpha
Helix 2
2
A
72 90Right-handed alpha
Helix 3
3
A
93 101Right-handed alpha
Helix 4
4
A
112 122Right-handed alpha
Helix 5
5
A
173 187Right-handed alpha
Helix 6
6
A
215 235Right-handed alpha
Helix 7
7
A
243 247Right-handed alpha
Helix 8
8
A
253 261Right-handed alpha
Helix 9
9
A
282 284Right-handed 310
Helix 10
10
A
285 305Right-handed alpha
Helix 11
11
B
14 29Right-handed alpha
Helix 12
12
B
72 90Right-handed alpha
Helix 13
13
B
93 103Right-handed alpha
Helix 14
14
B
112 122Right-handed alpha
Helix 15
15
B
142 146Right-handed 310
Helix 16
16
B
173 187Right-handed alpha
Helix 17
17
B
215 232Right-handed alpha
Helix 18
18
B
243 247Right-handed alpha
Helix 19
19
B
253 261Right-handed alpha
Helix 20
20
B
282 284Right-handed 310
Helix 21
21
B
285 305Right-handed alpha
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There are 2 sheets in PDB entry 3HLP. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 40first strand
Strand 2
A
46 52anti-parallel
Strand 3
A
104 108anti-parallel
Strand 4
A
61 66parallel
Strand 5
A
189 196parallel
Strand 6
A
265 270parallel
Strand 7
A
201 204anti-parallel
Strand 8
A
239 242parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 40first strand
Strand 2
B
46 52anti-parallel
Strand 3
B
104 108anti-parallel
Strand 4
B
61 66parallel
Strand 5
B
189 196parallel
Strand 6
B
265 270parallel
Strand 7
B
201 204anti-parallel
Strand 8
B
239 242parallel
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