Analysis of interatomic Contacts of Structural Units in PDB entry:
3HLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HLY entry

There are 3 chains in PDB entry 3HLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 262ASP 406
B
 SER 262ALA 405
C
 SER 262LEU 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3HLY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
273 288Right-handed alpha
Helix 2
2
A
301 312Right-handed alpha
Helix 3
3
A
325 339Right-handed alpha
Helix 4
4
A
357 368Right-handed alpha
Helix 5
5
A
384 405Right-handed alpha
Helix 6
6
B
273 288Right-handed alpha
Helix 7
7
B
301 312Right-handed alpha
Helix 8
8
B
325 339Right-handed alpha
Helix 9
9
B
357 368Right-handed alpha
Helix 10
10
B
384 405Right-handed alpha
Helix 11
11
C
273 287Right-handed alpha
Helix 12
12
C
298 300Right-handed 310
Helix 13
13
C
301 312Right-handed alpha
Helix 14
14
C
323 327Right-handed 310
Helix 15
15
C
331 336Right-handed alpha
Helix 16
16
C
357 367Right-handed alpha
Helix 17
17
C
384 414Right-handed alpha
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There are 3 sheets in PDB entry 3HLY. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 296first strand
Strand 2
A
263 267parallel
Strand 3
A
314 318parallel
Strand 4
A
344 348parallel
Strand 5
A
371 372parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 296first strand
Strand 2
B
263 267parallel
Strand 3
B
314 318parallel
Strand 4
B
344 348parallel
Strand 5
B
371 372parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
292 296first strand
Strand 2
C
263 267parallel
Strand 3
C
314 318parallel
Strand 4
C
344 348parallel
Strand 5
C
371 372parallel
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