Analysis of interatomic Contacts of Structural Units in PDB entry:
3HM7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HM7 entry

There are 6 chains in PDB entry 3HM7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3HIS 438
B
 LYS 2HIS 438
C
 ARG 3ASP 437
D
 ARG 3HIS 438
E
 ARG 3HIS 438
F
 ARG 3HIS 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are108 helices in PDB entry 3HM7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
71 75Right-handed 310
Helix 2
2
A
77 86Right-handed alpha
Helix 3
3
A
105 114Right-handed alpha
Helix 4
4
A
114 120Right-handed alpha
Helix 5
5
A
134 136Right-handed 310
Helix 6
6
A
137 144Right-handed alpha
Helix 7
7
A
165 180Right-handed alpha
Helix 8
8
A
189 203Right-handed alpha
Helix 9
9
A
207 215Right-handed alpha
Helix 10
10
A
216 235Right-handed alpha
Helix 11
11
A
245 258Right-handed alpha
Helix 12
12
A
267 273Right-handed alpha
Helix 13
13
A
274 282Right-handed alpha
Helix 14
14
A
293 307Right-handed alpha
Helix 15
15
A
320 325Right-handed 310
Helix 16
16
A
341 350Right-handed alpha
Helix 17
17
A
357 366Right-handed alpha
Helix 18
18
A
366 374Right-handed alpha
Helix 19
19
A
402 406Right-handed 310
Helix 20
20
B
71 75Right-handed 310
Helix 21
21
B
76 87Right-handed alpha
Helix 22
22
B
105 120Right-handed alpha
Helix 23
23
B
137 144Right-handed alpha
Helix 24
24
B
165 179Right-handed alpha
Helix 25
25
B
189 203Right-handed alpha
Helix 26
26
B
207 215Right-handed alpha
Helix 27
27
B
216 235Right-handed alpha
Helix 28
28
B
245 259Right-handed alpha
Helix 29
29
B
267 273Right-handed alpha
Helix 30
30
B
274 282Right-handed alpha
Helix 31
31
B
283 286Right-handed 310
Helix 32
32
B
293 306Right-handed alpha
Helix 33
33
B
341 350Right-handed alpha
Helix 34
34
B
357 366Right-handed alpha
Helix 35
35
B
366 373Right-handed alpha
Helix 36
36
B
402 406Right-handed 310
Helix 37
37
C
71 75Right-handed 310
Helix 38
38
C
76 86Right-handed alpha
Helix 39
39
C
105 120Right-handed alpha
Helix 40
40
C
136 143Right-handed alpha
Helix 41
41
C
165 179Right-handed alpha
Helix 42
42
C
189 203Right-handed alpha
Helix 43
43
C
207 213Right-handed alpha
Helix 44
44
C
216 235Right-handed alpha
Helix 45
45
C
245 258Right-handed alpha
Helix 46
46
C
267 273Right-handed alpha
Helix 47
47
C
274 282Right-handed alpha
Helix 48
48
C
283 286Right-handed 310
Helix 49
49
C
293 305Right-handed alpha
Helix 50
50
C
320 325Right-handed 310
Helix 51
51
C
341 347Right-handed alpha
Helix 52
52
C
357 366Right-handed alpha
Helix 53
53
C
366 373Right-handed alpha
Helix 54
54
D
71 75Right-handed 310
Helix 55
55
D
76 86Right-handed alpha
Helix 56
56
D
105 120Right-handed alpha
Helix 57
57
D
137 144Right-handed alpha
Helix 58
58
D
165 179Right-handed alpha
Helix 59
59
D
189 203Right-handed alpha
Helix 60
60
D
207 215Right-handed alpha
Helix 61
61
D
216 235Right-handed alpha
Helix 62
62
D
245 258Right-handed alpha
Helix 63
63
D
267 273Right-handed alpha
Helix 64
64
D
274 280Right-handed alpha
Helix 65
65
D
282 286Right-handed 310
Helix 66
66
D
293 306Right-handed alpha
Helix 67
67
D
320 325Right-handed 310
Helix 68
68
D
341 350Right-handed alpha
Helix 69
69
D
357 366Right-handed alpha
Helix 70
70
D
366 373Right-handed alpha
Helix 71
71
D
402 406Right-handed 310
Helix 72
72
E
71 75Right-handed 310
Helix 73
73
E
76 87Right-handed alpha
Helix 74
74
E
105 120Right-handed alpha
Helix 75
75
E
133 136Right-handed 310
Helix 76
76
E
137 144Right-handed alpha
Helix 77
77
E
165 180Right-handed alpha
Helix 78
78
E
189 203Right-handed alpha
Helix 79
79
E
207 215Right-handed alpha
Helix 80
80
E
216 235Right-handed alpha
Helix 81
81
E
245 258Right-handed alpha
Helix 82
82
E
267 273Right-handed alpha
Helix 83
83
E
274 282Right-handed alpha
Helix 84
84
E
283 286Right-handed 310
Helix 85
85
E
293 306Right-handed alpha
Helix 86
86
E
320 325Right-handed 310
Helix 87
87
E
341 350Right-handed alpha
Helix 88
88
E
357 366Right-handed alpha
Helix 89
89
E
366 373Right-handed alpha
Helix 90
90
E
402 406Right-handed 310
Helix 91
91
F
76 86Right-handed alpha
Helix 92
92
F
105 120Right-handed alpha
Helix 93
93
F
134 136Right-handed 310
Helix 94
94
F
137 144Right-handed alpha
Helix 95
95
F
165 179Right-handed alpha
Helix 96
96
F
189 203Right-handed alpha
Helix 97
97
F
207 215Right-handed alpha
Helix 98
98
F
216 235Right-handed alpha
Helix 99
99
F
245 258Right-handed alpha
Helix 100
100
F
267 273Right-handed alpha
Helix 101
101
F
274 282Right-handed alpha
Helix 102
102
F
283 286Right-handed 310
Helix 103
103
F
293 306Right-handed alpha
Helix 104
104
F
320 325Right-handed 310
Helix 105
105
F
341 350Right-handed alpha
Helix 106
106
F
357 366Right-handed alpha
Helix 107
107
F
366 373Right-handed alpha
Helix 108
108
F
402 406Right-handed 310
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There are 15 sheets in PDB entry 3HM7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
6 14parallel
Strand 3
A
19 27anti-parallel
Strand 4
A
30 35anti-parallel
Strand 5
E
30 35anti-parallel
Strand 6
E
19 27anti-parallel
Strand 7
E
6 14anti-parallel
Strand 8
E
47 49parallel
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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 436first strand
Strand 2
A
419 429anti-parallel
Strand 3
A
390 400anti-parallel
Strand 4
A
54 57anti-parallel
Strand 5
A
6 14parallel
Strand 6
A
19 27anti-parallel
Strand 7
A
30 35anti-parallel
Strand 8
E
30 35anti-parallel
Strand 9
E
19 27anti-parallel
Strand 10
E
6 14anti-parallel
Strand 11
E
54 57parallel
Strand 12
E
390 400anti-parallel
Strand 13
E
419 429anti-parallel
Strand 14
E
432 436anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 64first strand
Strand 2
A
89 94parallel
Strand 3
A
123 129parallel
Strand 4
A
148 152parallel
Strand 5
A
183 186parallel
Strand 6
A
238 240parallel
Strand 7
A
262 266parallel
Strand 8
A
311 312parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
6 14parallel
Strand 3
B
54 57parallel
Strand 4
B
390 400anti-parallel
Strand 5
B
419 429anti-parallel
Strand 6
B
432 436anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
6 14parallel
Strand 3
B
19 27anti-parallel
Strand 4
B
30 35anti-parallel
Strand 5
F
30 35anti-parallel
Strand 6
F
23 27anti-parallel
Strand 7
F
6 9anti-parallel
Strand 8
F
47 49parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 64first strand
Strand 2
B
89 94parallel
Strand 3
B
123 129parallel
Strand 4
B
148 152parallel
Strand 5
B
183 186parallel
Strand 6
B
238 240parallel
Strand 7
B
262 266parallel
Strand 8
B
311 312parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 49first strand
Strand 2
C
6 14parallel
Strand 3
C
19 27anti-parallel
Strand 4
C
30 35anti-parallel
Strand 5
D
30 35anti-parallel
Strand 6
D
19 27anti-parallel
Strand 7
D
6 14anti-parallel
Strand 8
D
47 49parallel
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There are 14 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
432 436first strand
Strand 2
C
419 429anti-parallel
Strand 3
C
390 400anti-parallel
Strand 4
C
54 57anti-parallel
Strand 5
C
6 14parallel
Strand 6
C
19 27anti-parallel
Strand 7
C
30 35anti-parallel
Strand 8
D
30 35anti-parallel
Strand 9
D
19 27anti-parallel
Strand 10
D
6 14anti-parallel
Strand 11
D
54 57parallel
Strand 12
D
390 400anti-parallel
Strand 13
D
419 429anti-parallel
Strand 14
D
432 436anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 64first strand
Strand 2
C
89 94parallel
Strand 3
C
123 130parallel
Strand 4
C
148 152parallel
Strand 5
C
183 186parallel
Strand 6
C
238 240parallel
Strand 7
C
262 266parallel
Strand 8
C
311 312parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
59 64first strand
Strand 2
D
89 94parallel
Strand 3
D
123 126parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
128 129first strand
Strand 2
D
149 152parallel
Strand 3
D
183 186parallel
Strand 4
D
238 240parallel
Strand 5
D
262 266parallel
Strand 6
D
311 312parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 64first strand
Strand 2
E
89 94parallel
Strand 3
E
123 126parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
128 129first strand
Strand 2
E
149 152parallel
Strand 3
E
183 186parallel
Strand 4
E
238 240parallel
Strand 5
E
262 266parallel
Strand 6
E
311 312parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 21first strand
Strand 2
F
12 14anti-parallel
Strand 3
F
54 57parallel
Strand 4
F
390 401anti-parallel
Strand 5
F
418 429anti-parallel
Strand 6
F
432 436anti-parallel
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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
59 64first strand
Strand 2
F
89 94parallel
Strand 3
F
123 129parallel
Strand 4
F
148 152parallel
Strand 5
F
183 186parallel
Strand 6
F
238 240parallel
Strand 7
F
262 266parallel
Strand 8
F
311 312parallel
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