Analysis of interatomic Contacts of Structural Units in PDB entry:
3HN0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HN0 entry

There are 2 chains in PDB entry 3HN0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 23GLN 302
B
 THR 21GLU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 3HN0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
39 45Right-handed alpha
Helix 3
3
A
61 71Right-handed alpha
Helix 4
4
A
81 90Right-handed alpha
Helix 5
5
A
125 139Right-handed alpha
Helix 6
6
A
150 160Right-handed alpha
Helix 7
7
A
171 180Right-handed alpha
Helix 8
8
A
209 213Right-handed 310
Helix 9
9
A
214 232Right-handed alpha
Helix 10
10
A
232 243Right-handed alpha
Helix 11
11
A
252 260Right-handed alpha
Helix 12
12
A
269 284Right-handed alpha
Helix 13
13
A
285 289Right-handed 310
Helix 14
14
A
294 298Right-handed 310
Helix 15
15
B
35 40Right-handed alpha
Helix 16
16
B
40 45Right-handed alpha
Helix 17
17
B
61 71Right-handed alpha
Helix 18
18
B
81 90Right-handed alpha
Helix 19
19
B
125 138Right-handed alpha
Helix 20
20
B
150 160Right-handed alpha
Helix 21
21
B
171 180Right-handed alpha
Helix 22
22
B
209 213Right-handed 310
Helix 23
23
B
214 232Right-handed alpha
Helix 24
24
B
232 243Right-handed alpha
Helix 25
25
B
252 260Right-handed alpha
Helix 26
26
B
269 284Right-handed alpha
Helix 27
27
B
284 289Right-handed alpha
Helix 28
28
B
294 298Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 3HN0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
52 59anti-parallel
Strand 3
A
25 31parallel
Strand 4
A
76 80parallel
Strand 5
A
203 207anti-parallel
Strand 6
A
95 101anti-parallel
Strand 7
A
261 265anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 168first strand
Strand 2
A
106 109anti-parallel
Strand 3
A
184 188anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 119first strand
Strand 2
A
144 145parallel
Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
52 59anti-parallel
Strand 3
B
25 31parallel
Strand 4
B
76 80parallel
Strand 5
B
203 207anti-parallel
Strand 6
B
95 101anti-parallel
Strand 7
B
261 265anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 168first strand
Strand 2
B
106 110anti-parallel
Strand 3
B
183 188anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 119first strand
Strand 2
B
144 145parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il