Analysis of interatomic Contacts of Structural Units in PDB entry:
3HOP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HOP entry

There are 2 chains in PDB entry 3HOP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 37LEU 269
B
 ALA 39LEU 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3HOP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 42Right-handed 310
Helix 2
2
A
43 58Right-handed alpha
Helix 3
3
A
59 61Right-handed 310
Helix 4
4
A
74 86Right-handed alpha
Helix 5
5
A
99 117Right-handed alpha
Helix 6
6
A
125 131Right-handed alpha
Helix 7
7
A
133 149Right-handed alpha
Helix 8
8
A
167 180Right-handed alpha
Helix 9
9
A
189 193Right-handed 310
Helix 10
10
A
195 206Right-handed alpha
Helix 11
11
A
212 216Right-handed 310
Helix 12
12
A
220 237Right-handed alpha
Helix 13
13
A
243 248Right-handed alpha
Helix 14
14
A
253 262Right-handed alpha
Helix 15
15
A
262 267Right-handed alpha
Helix 16
16
B
39 42Right-handed 310
Helix 17
17
B
43 58Right-handed alpha
Helix 18
18
B
74 86Right-handed alpha
Helix 19
19
B
99 117Right-handed alpha
Helix 20
20
B
125 131Right-handed alpha
Helix 21
21
B
133 149Right-handed alpha
Helix 22
22
B
151 155Right-handed 310
Helix 23
23
B
167 180Right-handed alpha
Helix 24
24
B
189 193Right-handed 310
Helix 25
25
B
195 206Right-handed alpha
Helix 26
26
B
212 216Right-handed 310
Helix 27
27
B
220 237Right-handed alpha
Helix 28
28
B
243 248Right-handed alpha
Helix 29
29
B
253 262Right-handed alpha
Helix 30
30
B
262 267Right-handed alpha
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There are no sheets in PDB entry 3HOP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il