Analysis of interatomic Contacts of Structural Units in PDB entry:
3HP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HP7 entry

There is 1 chain in PDB entry 3HP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLU 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3HP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
18 28Right-handed alpha
Helix 3
3
A
66 77Right-handed alpha
Helix 4
4
A
94 103Right-handed alpha
Helix 5
5
A
119 124Right-handed alpha
Helix 6
6
A
135 139Right-handed 310
Helix 7
7
A
140 144Right-handed 310
Helix 8
8
A
160 163Right-handed 310
Helix 9
9
A
164 172Right-handed alpha
Helix 10
10
A
183 187Right-handed 310
Helix 11
11
A
189 193Right-handed 310
Helix 12
12
A
201 219Right-handed alpha
Helix 13
13
A
233 237Right-handed 310
Helix 14
14
A
254 256Right-handed 310
Helix 15
15
A
257 275Right-handed alpha
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There are 3 sheets in PDB entry 3HP7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
46 48anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 33first strand
Strand 2
A
53 55anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 131first strand
Strand 2
A
107 111parallel
Strand 3
A
85 89parallel
Strand 4
A
151 154parallel
Strand 5
A
177 182parallel
Strand 6
A
240 246anti-parallel
Strand 7
A
221 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il