Analysis of interatomic Contacts of Structural Units in PDB entry:
3HR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HR8 entry

There is 1 chain in PDB entry 3HR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4ARG 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3HR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 23Right-handed alpha
Helix 2
2
A
46 53Right-handed alpha
Helix 3
3
A
73 88Right-handed alpha
Helix 4
4
A
102 110Right-handed alpha
Helix 5
5
A
112 116Right-handed 310
Helix 6
6
A
123 137Right-handed alpha
Helix 7
7
A
153 158Right-handed alpha
Helix 8
8
A
167 186Right-handed alpha
Helix 9
9
A
212 221Right-handed alpha
Helix 10
10
A
271 283Right-handed alpha
Helix 11
11
A
308 319Right-handed alpha
Helix 12
12
A
319 334Right-handed alpha
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There are 3 sheets in PDB entry 3HR8. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
A
58 59anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 119first strand
Strand 2
A
92 96parallel
Strand 3
A
142 146parallel
Strand 4
A
190 196parallel
Strand 5
A
62 68parallel
Strand 6
A
223 235parallel
Strand 7
A
238 251anti-parallel
Strand 8
A
259 265anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 289first strand
Strand 2
A
292 296anti-parallel
Strand 3
A
302 307anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il