Analysis of interatomic Contacts of Structural Units in PDB entry:
3HRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HRP entry

There is 1 chain in PDB entry 3HRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 31GLU 430
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 3HRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 67Right-handed 310
Helix 2
2
A
223 225Right-handed 310
Helix 3
3
A
339 341Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 3HRP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 45first strand
Strand 2
A
54 60anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
79 88anti-parallel
Strand 5
A
69 74anti-parallel
Strand 6
A
102 110anti-parallel
Strand 7
A
121 123anti-parallel
Strand 8
A
48 49parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 45first strand
Strand 2
A
54 60anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
79 88anti-parallel
Strand 5
A
69 74anti-parallel
Strand 6
A
102 110anti-parallel
Strand 7
A
113 116anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 134first strand
Strand 2
A
423 430anti-parallel
Strand 3
A
413 418anti-parallel
Strand 4
A
403 408anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 159first strand
Strand 2
A
164 169anti-parallel
Strand 3
A
174 179anti-parallel
Strand 4
A
184 190anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
216 221anti-parallel
Strand 4
A
228 233anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
253 257anti-parallel
Strand 3
A
262 267anti-parallel
Strand 4
A
273 278anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 296first strand
Strand 2
A
301 306anti-parallel
Strand 3
A
311 315anti-parallel
Strand 4
A
321 326anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 337first strand
Strand 2
A
377 383anti-parallel
Strand 3
A
367 372anti-parallel
Strand 4
A
357 361anti-parallel
Strand 5
A
346 351anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il