Analysis of interatomic Contacts of Structural Units in PDB entry:
3HRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HRU entry

There are 2 chains in PDB entry 3HRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3ILE 215
B
 GLU 6ILE 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3HRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 16Right-handed alpha
Helix 2
2
A
23 31Right-handed alpha
Helix 3
3
A
34 48Right-handed alpha
Helix 4
4
A
62 88Right-handed alpha
Helix 5
5
A
90 103Right-handed alpha
Helix 6
6
A
106 117Right-handed alpha
Helix 7
7
A
161 170Right-handed alpha
Helix 8
8
A
203 208Right-handed alpha
Helix 9
9
B
6 15Right-handed alpha
Helix 10
10
B
23 32Right-handed alpha
Helix 11
11
B
42 48Right-handed alpha
Helix 12
12
B
62 86Right-handed alpha
Helix 13
13
B
90 103Right-handed alpha
Helix 14
14
B
106 117Right-handed alpha
Helix 15
15
B
161 171Right-handed alpha
Helix 16
16
B
203 208Right-handed alpha
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There are 4 sheets in PDB entry 3HRU. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
58 61anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
191 194anti-parallel
Strand 3
A
178 184anti-parallel
Strand 4
A
151 157anti-parallel
Strand 5
A
211 214anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 53first strand
Strand 2
B
59 61anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 202first strand
Strand 2
B
191 195anti-parallel
Strand 3
B
178 184anti-parallel
Strand 4
B
152 158anti-parallel
Strand 5
B
210 213anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il