Analysis of interatomic Contacts of Structural Units in PDB entry:
3HSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HSS entry

There are 2 chains in PDB entry 3HSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -12LYS 261
B
 ILE 2ALA 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3HSS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 29Right-handed 310
Helix 2
2
A
32 39Right-handed alpha
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
61 77Right-handed alpha
Helix 5
5
A
87 100Right-handed alpha
Helix 6
6
A
117 134Right-handed alpha
Helix 7
7
A
138 151Right-handed alpha
Helix 8
8
A
152 157Right-handed alpha
Helix 9
9
A
158 172Right-handed alpha
Helix 10
10
A
177 185Right-handed alpha
Helix 11
11
A
192 197Right-handed alpha
Helix 12
12
A
215 226Right-handed alpha
Helix 13
13
A
240 245Right-handed alpha
Helix 14
14
A
245 259Right-handed alpha
Helix 15
15
B
24 29Right-handed 310
Helix 16
16
B
32 39Right-handed alpha
Helix 17
17
B
51 55Right-handed 310
Helix 18
18
B
61 76Right-handed alpha
Helix 19
19
B
87 100Right-handed alpha
Helix 20
20
B
117 134Right-handed alpha
Helix 21
21
B
138 151Right-handed alpha
Helix 22
22
B
152 157Right-handed alpha
Helix 23
23
B
158 172Right-handed alpha
Helix 24
24
B
177 184Right-handed alpha
Helix 25
25
B
192 197Right-handed alpha
Helix 26
26
B
215 226Right-handed alpha
Helix 27
27
B
240 245Right-handed alpha
Helix 28
28
B
245 260Right-handed alpha
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There are 2 sheets in PDB entry 3HSS. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-11 -5first strand
Strand 2
A
1 9anti-parallel
Strand 3
A
41 46anti-parallel
Strand 4
A
13 18parallel
Strand 5
A
81 86parallel
Strand 6
A
104 110parallel
Strand 7
A
203 208parallel
Strand 8
A
229 234parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
14 18parallel
Strand 4
B
81 86parallel
Strand 5
B
104 110parallel
Strand 6
B
203 208parallel
Strand 7
B
229 234parallel
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