Analysis of interatomic Contacts of Structural Units in PDB entry:
3HU3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HU3 entry

There are 2 chains in PDB entry 3HU3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 17VAL 469
B
 LEU 17SER 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 45 helices in PDB entry 3HU3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 50Right-handed alpha
Helix 2
2
A
85 92Right-handed alpha
Helix 3
3
A
120 123Right-handed 310
Helix 4
4
A
129 134Right-handed alpha
Helix 5
5
A
134 140Right-handed alpha
Helix 6
6
A
190 199Right-handed alpha
Helix 7
7
A
202 206Right-handed 310
Helix 8
8
A
209 220Right-handed alpha
Helix 9
9
A
220 226Right-handed alpha
Helix 10
10
A
226 234Right-handed alpha
Helix 11
11
A
250 262Right-handed alpha
Helix 12
12
A
271 276Right-handed alpha
Helix 13
13
A
280 296Right-handed alpha
Helix 14
14
A
305 310Right-handed alpha
Helix 15
15
A
318 335Right-handed alpha
Helix 16
16
A
349 353Right-handed 310
Helix 17
17
A
354 359Right-handed 310
Helix 18
18
A
373 385Right-handed alpha
Helix 19
19
A
395 402Right-handed alpha
Helix 20
20
A
407 425Right-handed alpha
Helix 21
21
A
438 445Right-handed alpha
Helix 22
22
A
448 457Right-handed alpha
Helix 23
23
A
458 466Right-handed alpha
Helix 24
24
A
467 469Right-handed 310
Helix 25
25
B
42 50Right-handed alpha
Helix 26
26
B
85 92Right-handed alpha
Helix 27
27
B
129 134Right-handed alpha
Helix 28
28
B
134 140Right-handed alpha
Helix 29
29
B
190 199Right-handed alpha
Helix 30
30
B
202 206Right-handed 310
Helix 31
31
B
209 220Right-handed alpha
Helix 32
32
B
220 226Right-handed alpha
Helix 33
33
B
226 234Right-handed alpha
Helix 34
34
B
250 262Right-handed alpha
Helix 35
35
B
271 276Right-handed alpha
Helix 36
36
B
280 296Right-handed alpha
Helix 37
37
B
305 310Right-handed alpha
Helix 38
38
B
318 335Right-handed alpha
Helix 39
39
B
349 353Right-handed 310
Helix 40
40
B
354 359Right-handed 310
Helix 41
41
B
373 385Right-handed alpha
Helix 42
42
B
395 402Right-handed alpha
Helix 43
43
B
407 425Right-handed alpha
Helix 44
44
B
438 445Right-handed alpha
Helix 45
45
B
448 459Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3HU3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 29first strand
Strand 2
A
81 83parallel
Strand 3
A
38 41anti-parallel
Strand 4
A
66 73parallel
Strand 5
A
56 60anti-parallel
Strand 6
A
99 104anti-parallel
Strand 7
A
25 29anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 156first strand
Strand 2
A
159 169anti-parallel
Strand 3
A
113 118anti-parallel
Strand 4
A
181 183parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 147first strand
Strand 2
A
173 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 270first strand
Strand 2
A
299 304parallel
Strand 3
A
341 347parallel
Strand 4
A
240 244parallel
Strand 5
A
365 368parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 29first strand
Strand 2
B
81 83parallel
Strand 3
B
38 41anti-parallel
Strand 4
B
66 73parallel
Strand 5
B
56 60anti-parallel
Strand 6
B
99 104anti-parallel
Strand 7
B
25 29anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
151 156first strand
Strand 2
B
159 169anti-parallel
Strand 3
B
113 118anti-parallel
Strand 4
B
181 183parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 147first strand
Strand 2
B
173 176anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 270first strand
Strand 2
B
299 304parallel
Strand 3
B
341 347parallel
Strand 4
B
240 244parallel
Strand 5
B
365 368parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il