Analysis of interatomic Contacts of Structural Units in PDB entry:
3HV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HV0 entry

There are 2 chains in PDB entry 3HV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 220LYS 587
B
 ASN 220LYS 587
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3HV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
221 226Right-handed alpha
Helix 2
2
A
232 244Right-handed alpha
Helix 3
3
A
248 253Right-handed alpha
Helix 4
4
A
261 271Right-handed alpha
Helix 5
5
A
292 307Right-handed alpha
Helix 6
6
A
315 323Right-handed alpha
Helix 7
7
A
327 344Right-handed alpha
Helix 8
8
A
357 375Right-handed alpha
Helix 9
9
A
376 385Right-handed alpha
Helix 10
10
A
391 403Right-handed alpha
Helix 11
11
A
404 409Right-handed 310
Helix 12
12
A
410 415Right-handed alpha
Helix 13
13
A
430 441Right-handed alpha
Helix 14
14
A
442 445Right-handed 310
Helix 15
15
A
481 493Right-handed alpha
Helix 16
16
A
514 524Right-handed alpha
Helix 17
17
A
526 540Right-handed alpha
Helix 18
18
A
543 568Right-handed alpha
Helix 19
19
A
570 579Right-handed alpha
Helix 20
20
B
220 227Right-handed alpha
Helix 21
21
B
232 244Right-handed alpha
Helix 22
22
B
248 253Right-handed alpha
Helix 23
23
B
261 271Right-handed alpha
Helix 24
24
B
292 307Right-handed alpha
Helix 25
25
B
315 323Right-handed alpha
Helix 26
26
B
327 344Right-handed alpha
Helix 27
27
B
357 373Right-handed alpha
Helix 28
28
B
376 385Right-handed alpha
Helix 29
29
B
391 397Right-handed alpha
Helix 30
30
B
397 403Right-handed alpha
Helix 31
31
B
404 409Right-handed 310
Helix 32
32
B
410 415Right-handed alpha
Helix 33
33
B
430 441Right-handed alpha
Helix 34
34
B
442 445Right-handed 310
Helix 35
35
B
481 493Right-handed alpha
Helix 36
36
B
514 524Right-handed alpha
Helix 37
37
B
526 540Right-handed alpha
Helix 38
38
B
543 568Right-handed alpha
Helix 39
39
B
570 579Right-handed alpha
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There are 2 sheets in PDB entry 3HV0. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
256 260anti-parallel
Strand 3
A
450 454anti-parallel
Strand 4
A
422 427parallel
Strand 5
A
276 281parallel
Strand 6
A
310 314parallel
Strand 7
A
352 356parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 230first strand
Strand 2
B
256 260anti-parallel
Strand 3
B
450 454anti-parallel
Strand 4
B
422 427parallel
Strand 5
B
276 281parallel
Strand 6
B
310 314parallel
Strand 7
B
352 356parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il