Analysis of interatomic Contacts of Structural Units in PDB entry:
3HV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HV1 entry

There are 2 chains in PDB entry 3HV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 27HIS 290
B
 SER 28HIS 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 3HV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 34Right-handed 310
Helix 2
2
A
36 44Right-handed alpha
Helix 3
3
A
68 80Right-handed alpha
Helix 4
4
A
91 93Right-handed 310
Helix 5
5
A
94 101Right-handed alpha
Helix 6
6
A
114 119Right-handed alpha
Helix 7
7
A
139 141Right-handed 310
Helix 8
8
A
145 149Right-handed 310
Helix 9
9
A
159 168Right-handed alpha
Helix 10
10
A
176 179Right-handed 310
Helix 11
11
A
186 196Right-handed alpha
Helix 12
12
A
206 216Right-handed alpha
Helix 13
13
A
218 220Right-handed 310
Helix 14
14
A
242 259Right-handed alpha
Helix 15
15
A
260 271Right-handed alpha
Helix 16
16
B
30 34Right-handed 310
Helix 17
17
B
36 44Right-handed alpha
Helix 18
18
B
68 80Right-handed alpha
Helix 19
19
B
91 93Right-handed 310
Helix 20
20
B
94 101Right-handed alpha
Helix 21
21
B
116 120Right-handed 310
Helix 22
22
B
139 141Right-handed 310
Helix 23
23
B
144 149Right-handed 310
Helix 24
24
B
159 168Right-handed alpha
Helix 25
25
B
176 179Right-handed 310
Helix 26
26
B
186 197Right-handed alpha
Helix 27
27
B
206 216Right-handed alpha
Helix 28
28
B
218 220Right-handed 310
Helix 29
29
B
242 259Right-handed alpha
Helix 30
30
B
260 271Right-handed alpha
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There are 8 sheets in PDB entry 3HV1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 89first strand
Strand 2
A
45 50parallel
Strand 3
A
106 107parallel
Strand 4
A
237 238anti-parallel
Strand 5
A
122 123anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
58 60anti-parallel
Strand 3
A
66 67anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
232 234anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
153 156parallel
Strand 3
A
201 205parallel
Strand 4
A
132 137anti-parallel
Strand 5
A
222 226anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 89first strand
Strand 2
B
45 50parallel
Strand 3
B
106 107parallel
Strand 4
B
237 238anti-parallel
Strand 5
B
122 123anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
58 60anti-parallel
Strand 3
B
66 67anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 130first strand
Strand 2
B
232 234anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 184first strand
Strand 2
B
153 156parallel
Strand 3
B
201 205parallel
Strand 4
B
132 137anti-parallel
Strand 5
B
222 226anti-parallel
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