Analysis of interatomic Contacts of Structural Units in PDB entry:
3HVR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3HVR entry

There are 6 chains in PDB entry 3HVR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 3	VAL 685
B	LEU 4	VAL 685
C	T 1	T 16
M	T 1	T 16
D	C 8	G 19
N	C 9	C 18

There are 39 helices in PDB entry 3HVR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	20	25	Right-handed alpha
Helix 2	2	A	42	54	Right-handed alpha
Helix 3	3	A	69	73	Right-handed 310
Helix 4	4	A	102	122	Right-handed alpha
Helix 5	5	A	180	185	Right-handed alpha
Helix 6	6	A	222	230	Right-handed alpha
Helix 7	7	A	282	300	Right-handed alpha
Helix 8	8	A	329	331	Right-handed 310
Helix 9	9	A	332	337	Right-handed alpha
Helix 10	10	A	358	373	Right-handed alpha
Helix 11	11	A	384	387	Right-handed 310
Helix 12	12	A	388	401	Right-handed alpha
Helix 13	13	A	414	427	Right-handed alpha
Helix 14	14	A	443	459	Right-handed alpha
Helix 15	15	A	515	534	Right-handed alpha
Helix 16	16	A	554	564	Right-handed alpha
Helix 17	17	A	627	639	Right-handed alpha
Helix 18	18	A	640	646	Right-handed 310
Helix 19	19	A	653	670	Right-handed alpha
Helix 20	20	A	673	677	Right-handed 310
Helix 21	21	B	42	53	Right-handed alpha
Helix 22	22	B	69	73	Right-handed 310
Helix 23	23	B	102	123	Right-handed alpha
Helix 24	24	B	180	185	Right-handed alpha
Helix 25	25	B	222	230	Right-handed alpha
Helix 26	26	B	282	301	Right-handed alpha
Helix 27	27	B	329	331	Right-handed 310
Helix 28	28	B	332	337	Right-handed alpha
Helix 29	29	B	358	372	Right-handed alpha
Helix 30	30	B	384	387	Right-handed 310
Helix 31	31	B	388	401	Right-handed alpha
Helix 32	32	B	414	428	Right-handed alpha
Helix 33	33	B	443	458	Right-handed alpha
Helix 34	34	B	515	534	Right-handed alpha
Helix 35	35	B	554	565	Right-handed alpha
Helix 36	36	B	627	639	Right-handed alpha
Helix 37	37	B	640	646	Right-handed 310
Helix 38	38	B	653	670	Right-handed alpha
Helix 39	39	B	672	677	Right-handed 310

There are 18 sheets in PDB entry 3HVR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	140	first strand
Strand 2	A	145	157	anti-parallel
Strand 3	A	162	175	anti-parallel
Strand 4	A	5	18	anti-parallel
Strand 5	A	307	315	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	140	first strand
Strand 2	A	145	157	anti-parallel
Strand 3	A	162	175	anti-parallel
Strand 4	A	5	18	anti-parallel
Strand 5	A	581	583	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	60	first strand
Strand 2	A	63	66	anti-parallel
Strand 3	A	27	31	anti-parallel
Strand 4	A	87	95	anti-parallel
Strand 5	A	76	78	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	201	202	first strand
Strand 2	A	193	195	anti-parallel
Strand 3	A	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	321	322	first strand
Strand 2	A	464	465	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	378	first strand
Strand 2	A	344	350	parallel
Strand 3	A	403	409	parallel
Strand 4	A	432	435	parallel

Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	501	503	first strand
Strand 2	A	486	494	anti-parallel
Strand 3	A	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	501	503	first strand
Strand 2	A	486	494	anti-parallel
Strand 3	A	473	479	anti-parallel
Strand 4	A	540	546	parallel
Strand 5	A	567	574	parallel
Strand 6	A	617	623	anti-parallel
Strand 7	A	601	603	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	140	first strand
Strand 2	B	145	157	anti-parallel
Strand 3	B	162	171	anti-parallel
Strand 4	B	6	18	anti-parallel
Strand 5	B	307	314	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	175	first strand
Strand 2	B	145	157	anti-parallel
Strand 3	B	162	171	anti-parallel
Strand 4	B	6	18	anti-parallel
Strand 5	B	581	583	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	60	first strand
Strand 2	B	63	66	anti-parallel
Strand 3	B	27	30	anti-parallel
Strand 4	B	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	78	first strand
Strand 2	B	87	89	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	201	202	first strand
Strand 2	B	193	195	anti-parallel
Strand 3	B	261	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	241	243	first strand
Strand 2	B	255	257	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	321	322	first strand
Strand 2	B	464	465	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	378	first strand
Strand 2	B	344	350	parallel
Strand 3	B	403	410	parallel
Strand 4	B	432	436	parallel

Back to list of sheets
Back to top of page

There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	486	495	anti-parallel
Strand 3	B	507	509	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	503	first strand
Strand 2	B	486	495	anti-parallel
Strand 3	B	473	479	anti-parallel
Strand 4	B	540	546	parallel
Strand 5	B	567	574	parallel
Strand 6	B	617	623	anti-parallel
Strand 7	B	600	603	anti-parallel
Strand 8	B	593	595	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3HVR

Analysis of interatomic Contacts of Structural Units in PDB entry:
3HVR