Analysis of interatomic Contacts of Structural Units in PDB entry:
3HVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HVT entry

There are 2 chains in PDB entry 3HVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2ILE 556
B
 ILE 2GLN 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3HVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A
A
27 44Right-handed alpha
Helix 2
B
A
78 85Right-handed alpha
Helix 3
C
A
113 118Right-handed alpha
Helix 4
D
A
124 128Right-handed alpha
Helix 5
E
A
154 174Right-handed alpha
Helix 6
F
A
195 212Right-handed alpha
Helix 7
H
A
253 268Right-handed alpha
Helix 8
I
A
276 281Right-handed alpha
Helix 9
J
A
298 310Right-handed alpha
Helix 10
K
A
364 383Right-handed alpha
Helix 11
L
A
395 404Right-handed alpha
Helix 12
RA
A
474 488Right-handed alpha
Helix 13
RB
A
500 508Right-handed alpha
Helix 14
RD
A
516 527Right-handed alpha
Helix 15
RE
A
544 555Right-handed alpha
Helix 16
A
B
28 44Right-handed alpha
Helix 17
B
B
78 85Right-handed alpha
Helix 18
C
B
112 116Right-handed alpha
Helix 19
D
B
123 128Right-handed alpha
Helix 20
E
B
154 175Right-handed alpha
Helix 21
F
B
198 212Right-handed alpha
Helix 22
H
B
254 270Right-handed alpha
Helix 23
I
B
277 282Right-handed alpha
Helix 24
J
B
298 310Right-handed alpha
Helix 25
K
B
364 383Right-handed alpha
Helix 26
L
B
395 401Right-handed alpha
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There are 11 sheets in PDB entry 3HVT. Click on sheet of interest to get list of strands forming it: S1, S2, S3, S4, S5, S5A, R1, S6, S7, S8, S9,

There are 3 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 51first strand
Strand 2
A
128 133anti-parallel
Strand 3
A
140 146anti-parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
71 76anti-parallel
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There are 4 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
104 112anti-parallel
Strand 3
A
178 183anti-parallel
Strand 4
A
186 191anti-parallel
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There are 4 strands in S4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 230first strand
Strand 2
A
232 235anti-parallel
Strand 3
A
238 242anti-parallel
Strand 4
A
315 319anti-parallel
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There are 5 strands in S5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 355first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
326 331anti-parallel
Strand 4
A
387 391parallel
Strand 5
A
413 418parallel
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There are 1 strands in S5A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 412first strand
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There are 5 strands in R1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 470first strand
Strand 2
A
452 459anti-parallel
Strand 3
A
438 447anti-parallel
Strand 4
A
492 497parallel
Strand 5
A
530 536parallel
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There are 3 strands in S6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
58 64parallel
Strand 3
B
71 76anti-parallel
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There are 3 strands in S7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
129 132anti-parallel
Strand 3
B
141 146parallel
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There are 4 strands in S8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 217first strand
Strand 2
B
105 110anti-parallel
Strand 3
B
178 183anti-parallel
Strand 4
B
186 191anti-parallel
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There are 5 strands in S9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 355first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
325 333anti-parallel
Strand 4
B
387 391parallel
Strand 5
B
412 418parallel
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