Analysis of interatomic Contacts of Structural Units in PDB entry:
3HVX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HVX entry

There are 4 chains in PDB entry 3HVX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2ALA 168
B
 SER 2ALA 168
C
 SER 2ALA 168
D
 SER 2ALA 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3HVX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 44Right-handed 310
Helix 2
2
A
61 75Right-handed alpha
Helix 3
3
A
87 96Right-handed alpha
Helix 4
4
A
112 118Right-handed alpha
Helix 5
5
A
124 128Right-handed 310
Helix 6
6
A
158 167Right-handed alpha
Helix 7
7
B
41 44Right-handed 310
Helix 8
8
B
61 74Right-handed alpha
Helix 9
9
B
87 96Right-handed alpha
Helix 10
10
B
112 118Right-handed alpha
Helix 11
11
B
158 165Right-handed alpha
Helix 12
12
C
41 44Right-handed 310
Helix 13
13
C
61 74Right-handed alpha
Helix 14
14
C
87 96Right-handed alpha
Helix 15
15
C
112 118Right-handed alpha
Helix 16
16
C
158 168Right-handed alpha
Helix 17
17
D
41 44Right-handed 310
Helix 18
18
D
61 74Right-handed alpha
Helix 19
19
D
87 96Right-handed alpha
Helix 20
20
D
112 118Right-handed alpha
Helix 21
21
D
158 167Right-handed alpha
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There are 12 sheets in PDB entry 3HVX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
10 14anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 31first strand
Strand 2
A
37 39anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
78 84parallel
Strand 3
A
47 52parallel
Strand 4
A
134 138anti-parallel
Strand 5
A
144 149anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 7first strand
Strand 2
B
10 14anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 31first strand
Strand 2
B
37 39anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 107first strand
Strand 2
B
78 84parallel
Strand 3
B
47 53parallel
Strand 4
B
134 138anti-parallel
Strand 5
B
144 149anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 7first strand
Strand 2
C
10 14anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
29 31first strand
Strand 2
C
37 39anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 107first strand
Strand 2
C
78 84parallel
Strand 3
C
47 53parallel
Strand 4
C
134 138anti-parallel
Strand 5
C
144 149anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 7first strand
Strand 2
D
10 14anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
29 31first strand
Strand 2
D
37 39anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 107first strand
Strand 2
D
78 84parallel
Strand 3
D
47 52parallel
Strand 4
D
134 138anti-parallel
Strand 5
D
144 149anti-parallel
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