Analysis of interatomic Contacts of Structural Units in PDB entry:
3HWC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3HWC entry

There are 4 chains in PDB entry 3HWC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 3001	GLY 3482
B	MET 2001	GLY 2482
C	MET 1001	GLY 1482
D	MET 1	GLY 482

There are 96 helices in PDB entry 3HWC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	3003	3011	Right-handed alpha
Helix 2	2	A	3033	3047	Right-handed alpha
Helix 3	3	A	3048	3051	Right-handed 310
Helix 4	4	A	3052	3056	Right-handed alpha
Helix 5	5	A	3069	3071	Right-handed 310
Helix 6	6	A	3075	3093	Right-handed alpha
Helix 7	7	A	3094	3097	Right-handed 310
Helix 8	8	A	3101	3107	Right-handed alpha
Helix 9	9	A	3109	3114	Right-handed alpha
Helix 10	10	A	3116	3122	Right-handed alpha
Helix 11	11	A	3130	3145	Right-handed alpha
Helix 12	12	A	3194	3197	Right-handed 310
Helix 13	13	A	3211	3214	Right-handed 310
Helix 14	14	A	3275	3278	Right-handed 310
Helix 15	15	A	3279	3315	Right-handed alpha
Helix 16	16	A	3319	3346	Right-handed alpha
Helix 17	17	A	3358	3385	Right-handed alpha
Helix 18	18	A	3386	3389	Right-handed 310
Helix 19	19	A	3393	3399	Right-handed alpha
Helix 20	20	A	3402	3410	Right-handed alpha
Helix 21	21	A	3417	3432	Right-handed alpha
Helix 22	22	A	3433	3442	Right-handed alpha
Helix 23	23	A	3469	3478	Right-handed alpha
Helix 24	24	B	2003	2012	Right-handed alpha
Helix 25	25	B	2033	2047	Right-handed alpha
Helix 26	26	B	2048	2051	Right-handed 310
Helix 27	27	B	2052	2056	Right-handed alpha
Helix 28	28	B	2069	2071	Right-handed 310
Helix 29	29	B	2075	2093	Right-handed alpha
Helix 30	30	B	2094	2097	Right-handed 310
Helix 31	31	B	2101	2107	Right-handed alpha
Helix 32	32	B	2109	2115	Right-handed alpha
Helix 33	33	B	2116	2122	Right-handed alpha
Helix 34	34	B	2130	2145	Right-handed alpha
Helix 35	35	B	2194	2197	Right-handed 310
Helix 36	36	B	2245	2249	Right-handed 310
Helix 37	37	B	2279	2285	Right-handed alpha
Helix 38	38	B	2285	2314	Right-handed alpha
Helix 39	39	B	2319	2346	Right-handed alpha
Helix 40	40	B	2358	2385	Right-handed alpha
Helix 41	41	B	2386	2389	Right-handed 310
Helix 42	42	B	2393	2398	Right-handed alpha
Helix 43	43	B	2402	2410	Right-handed alpha
Helix 44	44	B	2417	2432	Right-handed alpha
Helix 45	45	B	2433	2446	Right-handed alpha
Helix 46	46	B	2448	2456	Right-handed alpha
Helix 47	47	B	2469	2478	Right-handed alpha
Helix 48	48	C	1003	1012	Right-handed alpha
Helix 49	49	C	1033	1047	Right-handed alpha
Helix 50	50	C	1048	1051	Right-handed 310
Helix 51	51	C	1052	1056	Right-handed alpha
Helix 52	52	C	1069	1071	Right-handed 310
Helix 53	53	C	1075	1093	Right-handed alpha
Helix 54	54	C	1094	1097	Right-handed 310
Helix 55	55	C	1101	1107	Right-handed alpha
Helix 56	56	C	1109	1115	Right-handed alpha
Helix 57	57	C	1117	1122	Right-handed alpha
Helix 58	58	C	1131	1145	Right-handed alpha
Helix 59	59	C	1194	1197	Right-handed 310
Helix 60	60	C	1211	1214	Right-handed 310
Helix 61	61	C	1279	1285	Right-handed alpha
Helix 62	62	C	1285	1314	Right-handed alpha
Helix 63	63	C	1319	1346	Right-handed alpha
Helix 64	64	C	1358	1385	Right-handed alpha
Helix 65	65	C	1386	1389	Right-handed 310
Helix 66	66	C	1393	1399	Right-handed alpha
Helix 67	67	C	1402	1410	Right-handed alpha
Helix 68	68	C	1416	1432	Right-handed alpha
Helix 69	69	C	1433	1438	Right-handed alpha
Helix 70	70	C	1439	1441	Right-handed 310
Helix 71	71	C	1448	1461	Right-handed alpha
Helix 72	72	C	1469	1477	Right-handed alpha
Helix 73	73	D	3	12	Right-handed alpha
Helix 74	74	D	33	47	Right-handed alpha
Helix 75	75	D	48	51	Right-handed 310
Helix 76	76	D	52	56	Right-handed alpha
Helix 77	77	D	69	71	Right-handed 310
Helix 78	78	D	75	93	Right-handed alpha
Helix 79	79	D	94	97	Right-handed 310
Helix 80	80	D	101	106	Right-handed alpha
Helix 81	81	D	109	115	Right-handed alpha
Helix 82	82	D	116	122	Right-handed alpha
Helix 83	83	D	130	145	Right-handed alpha
Helix 84	84	D	163	167	Right-handed 310
Helix 85	85	D	194	197	Right-handed 310
Helix 86	86	D	211	214	Right-handed 310
Helix 87	87	D	279	314	Right-handed alpha
Helix 88	88	D	319	346	Right-handed alpha
Helix 89	89	D	358	385	Right-handed alpha
Helix 90	90	D	386	389	Right-handed 310
Helix 91	91	D	393	399	Right-handed alpha
Helix 92	92	D	402	410	Right-handed alpha
Helix 93	93	D	416	432	Right-handed alpha
Helix 94	94	D	433	442	Right-handed alpha
Helix 95	95	D	448	458	Right-handed alpha
Helix 96	96	D	469	478	Right-handed alpha

There are 16 sheets in PDB entry 3HWC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3022	3024	first strand
Strand 2	A	3016	3019	anti-parallel
Strand 3	A	3227	3231	parallel
Strand 4	A	3253	3264	anti-parallel
Strand 5	A	3181	3192	anti-parallel
Strand 6	A	3173	3177	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3057	3059	first strand
Strand 2	A	3065	3067	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3151	3152	first strand
Strand 2	A	3199	3202	parallel
Strand 3	A	3216	3221	anti-parallel
Strand 4	A	3268	3271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3348	3349	first strand
Strand 2	A	3355	3356	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2022	2024	first strand
Strand 2	B	2016	2019	anti-parallel
Strand 3	B	2227	2231	parallel
Strand 4	B	2253	2264	anti-parallel
Strand 5	B	2181	2192	anti-parallel
Strand 6	B	2173	2177	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2057	2059	first strand
Strand 2	B	2065	2067	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2151	2152	first strand
Strand 2	B	2199	2202	parallel
Strand 3	B	2216	2221	anti-parallel
Strand 4	B	2268	2271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2348	2349	first strand
Strand 2	B	2355	2356	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1022	1024	first strand
Strand 2	C	1016	1019	anti-parallel
Strand 3	C	1227	1231	parallel
Strand 4	C	1253	1264	anti-parallel
Strand 5	C	1181	1192	anti-parallel
Strand 6	C	1173	1177	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1057	1059	first strand
Strand 2	C	1065	1067	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1151	1152	first strand
Strand 2	C	1199	1202	parallel
Strand 3	C	1216	1221	anti-parallel
Strand 4	C	1268	1271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1348	1349	first strand
Strand 2	C	1355	1356	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	22	23	first strand
Strand 2	D	16	19	anti-parallel
Strand 3	D	227	231	parallel
Strand 4	D	253	264	anti-parallel
Strand 5	D	181	192	anti-parallel
Strand 6	D	173	177	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	57	59	first strand
Strand 2	D	65	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	152	first strand
Strand 2	D	199	202	parallel
Strand 3	D	216	221	anti-parallel
Strand 4	D	268	271	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	349	first strand
Strand 2	D	355	356	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3HWC

Analysis of interatomic Contacts of Structural Units in PDB entry:
3HWC