Analysis of interatomic Contacts of Structural Units in PDB entry:
3HWP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HWP entry

There are 2 chains in PDB entry 3HWP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4THR 291
B
 ARG 4THR 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3HWP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 28Right-handed alpha
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
44 50Right-handed alpha
Helix 4
4
A
56 60Right-handed 310
Helix 5
5
A
64 70Right-handed alpha
Helix 6
6
A
71 73Right-handed 310
Helix 7
7
A
103 114Right-handed alpha
Helix 8
8
A
117 125Right-handed alpha
Helix 9
9
A
136 141Right-handed alpha
Helix 10
10
A
146 152Right-handed alpha
Helix 11
11
A
176 180Right-handed 310
Helix 12
12
A
182 189Right-handed alpha
Helix 13
13
A
234 240Right-handed 310
Helix 14
14
A
242 244Right-handed 310
Helix 15
15
A
245 253Right-handed alpha
Helix 16
16
A
256 290Right-handed alpha
Helix 17
17
B
13 28Right-handed alpha
Helix 18
18
B
32 36Right-handed 310
Helix 19
19
B
44 49Right-handed alpha
Helix 20
20
B
56 60Right-handed 310
Helix 21
21
B
64 69Right-handed alpha
Helix 22
22
B
70 73Right-handed 310
Helix 23
23
B
103 114Right-handed alpha
Helix 24
24
B
117 125Right-handed alpha
Helix 25
25
B
137 142Right-handed 310
Helix 26
26
B
146 152Right-handed alpha
Helix 27
27
B
175 180Right-handed 310
Helix 28
28
B
182 190Right-handed alpha
Helix 29
29
B
234 240Right-handed 310
Helix 30
30
B
242 244Right-handed 310
Helix 31
31
B
245 253Right-handed alpha
Helix 32
32
B
256 290Right-handed alpha
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There are 6 sheets in PDB entry 3HWP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
41 43anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
90 100anti-parallel
Strand 3
A
222 232anti-parallel
Strand 4
A
208 219anti-parallel
Strand 5
A
197 201anti-parallel
Strand 6
A
165 173anti-parallel
Strand 7
A
156 162anti-parallel
Strand 8
A
129 131anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
90 100anti-parallel
Strand 3
A
222 232anti-parallel
Strand 4
A
208 219anti-parallel
Strand 5
A
193 194anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
41 43anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
90 100anti-parallel
Strand 3
B
222 232anti-parallel
Strand 4
B
208 219anti-parallel
Strand 5
B
197 201anti-parallel
Strand 6
B
165 173anti-parallel
Strand 7
B
156 162anti-parallel
Strand 8
B
129 131anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
90 100anti-parallel
Strand 3
B
222 232anti-parallel
Strand 4
B
208 219anti-parallel
Strand 5
B
193 194anti-parallel
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