Analysis of interatomic Contacts of Structural Units in PDB entry:
3HWR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HWR entry

There are 2 chains in PDB entry 3HWR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLY 299
B
 MSE 1HIS 298
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 3HWR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
31 42Right-handed alpha
Helix 3
3
A
61 66Right-handed 310
Helix 4
4
A
76 78Right-handed 310
Helix 5
5
A
79 88Right-handed alpha
Helix 6
6
A
105 114Right-handed alpha
Helix 7
7
A
151 161Right-handed alpha
Helix 8
8
A
170 193Right-handed alpha
Helix 9
9
A
195 200Right-handed alpha
Helix 10
10
A
204 223Right-handed alpha
Helix 11
11
A
230 242Right-handed alpha
Helix 12
12
A
247 255Right-handed alpha
Helix 13
13
A
260 263Right-handed 310
Helix 14
14
A
264 275Right-handed alpha
Helix 15
15
A
279 298Right-handed alpha
Helix 16
16
B
9 22Right-handed alpha
Helix 17
17
B
31 42Right-handed alpha
Helix 18
18
B
61 66Right-handed 310
Helix 19
19
B
76 78Right-handed 310
Helix 20
20
B
79 88Right-handed alpha
Helix 21
21
B
105 114Right-handed alpha
Helix 22
22
B
151 161Right-handed alpha
Helix 23
23
B
170 193Right-handed alpha
Helix 24
24
B
195 200Right-handed alpha
Helix 25
25
B
204 223Right-handed alpha
Helix 26
26
B
230 242Right-handed alpha
Helix 27
27
B
247 255Right-handed alpha
Helix 28
28
B
260 263Right-handed 310
Helix 29
29
B
264 276Right-handed alpha
Helix 30
30
B
279 298Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3HWR. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
134 145parallel
Strand 4
A
117 131anti-parallel
Strand 5
A
96 100parallel
Strand 6
A
70 73parallel
Strand 7
A
2 6parallel
Strand 8
A
25 29parallel
Strand 9
A
57 59parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
43 46anti-parallel
Strand 3
A
134 145parallel
Strand 4
A
165 167parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
134 145parallel
Strand 4
B
117 131anti-parallel
Strand 5
B
96 100parallel
Strand 6
B
70 73parallel
Strand 7
B
2 6parallel
Strand 8
B
25 29parallel
Strand 9
B
57 59parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
43 46anti-parallel
Strand 3
B
134 145parallel
Strand 4
B
165 167parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il