Analysis of interatomic Contacts of Structural Units in PDB entry:
3HXR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HXR entry

There is 1 chain in PDB entry 3HXR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLU 730
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 3HXR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
135 140Right-handed alpha
Helix 2
2
A
369 374Right-handed alpha
Helix 3
3
A
385 393Right-handed alpha
Helix 4
4
A
403 415Right-handed alpha
Helix 5
5
A
416 430Right-handed alpha
Helix 6
6
A
439 458Right-handed alpha
Helix 7
7
A
488 496Right-handed alpha
Helix 8
8
A
505 518Right-handed alpha
Helix 9
9
A
521 538Right-handed alpha
Helix 10
10
A
545 558Right-handed alpha
Helix 11
11
A
563 575Right-handed alpha
Helix 12
12
A
578 589Right-handed alpha
Helix 13
13
A
609 640Right-handed alpha
Helix 14
14
A
647 670Right-handed alpha
Helix 15
15
A
671 683Right-handed alpha
Helix 16
16
A
694 711Right-handed alpha
Helix 17
17
A
718 730Right-handed alpha
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There are 7 sheets in PDB entry 3HXR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 10first strand
Strand 2
A
480 486anti-parallel
Strand 3
A
470 475anti-parallel
Strand 4
A
460 466anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
92 96parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
67 72anti-parallel
Strand 5
A
56 61anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
116 122anti-parallel
Strand 3
A
128 134anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 169first strand
Strand 2
A
173 177anti-parallel
Strand 3
A
183 186anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 229first strand
Strand 2
A
233 238anti-parallel
Strand 3
A
243 244anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 283first strand
Strand 2
A
286 291anti-parallel
Strand 3
A
297 301anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 337first strand
Strand 2
A
349 357anti-parallel
Strand 3
A
360 368anti-parallel
Strand 4
A
376 379anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il