Analysis of interatomic Contacts of Structural Units in PDB entry:
3HY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HY1 entry

There are 2 chains in PDB entry 3HY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1GLY 440
B
 SER 1GLU 437
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 3HY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
43 45Right-handed 310
Helix 3
3
A
46 51Right-handed alpha
Helix 4
4
A
77 80Right-handed 310
Helix 5
5
A
102 116Right-handed alpha
Helix 6
6
A
135 144Right-handed alpha
Helix 7
7
A
149 151Right-handed 310
Helix 8
8
A
240 248Right-handed alpha
Helix 9
9
A
252 255Right-handed 310
Helix 10
10
A
256 271Right-handed alpha
Helix 11
11
A
277 296Right-handed alpha
Helix 12
12
A
303 324Right-handed alpha
Helix 13
13
A
329 332Right-handed 310
Helix 14
14
A
333 340Right-handed alpha
Helix 15
15
A
341 344Right-handed 310
Helix 16
16
A
345 351Right-handed alpha
Helix 17
17
A
352 383Right-handed alpha
Helix 18
18
A
390 400Right-handed alpha
Helix 19
19
A
404 414Right-handed alpha
Helix 20
20
A
420 439Right-handed alpha
Helix 21
21
B
3 17Right-handed alpha
Helix 22
22
B
41 45Right-handed 310
Helix 23
23
B
46 52Right-handed alpha
Helix 24
24
B
77 80Right-handed 310
Helix 25
25
B
102 116Right-handed alpha
Helix 26
26
B
123 125Right-handed 310
Helix 27
27
B
135 145Right-handed alpha
Helix 28
28
B
149 151Right-handed 310
Helix 29
29
B
240 248Right-handed alpha
Helix 30
30
B
252 255Right-handed 310
Helix 31
31
B
256 271Right-handed alpha
Helix 32
32
B
277 296Right-handed alpha
Helix 33
33
B
303 324Right-handed alpha
Helix 34
34
B
329 332Right-handed 310
Helix 35
35
B
333 342Right-handed alpha
Helix 36
36
B
345 351Right-handed alpha
Helix 37
37
B
351 365Right-handed alpha
Helix 38
38
B
366 383Right-handed alpha
Helix 39
39
B
390 400Right-handed alpha
Helix 40
40
B
404 415Right-handed alpha
Helix 41
41
B
420 434Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3HY1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
60 68parallel
Strand 3
A
89 97anti-parallel
Strand 4
A
226 239anti-parallel
Strand 5
A
207 220anti-parallel
Strand 6
A
176 187anti-parallel
Strand 7
A
127 132anti-parallel
Strand 8
A
153 156parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 22first strand
Strand 2
A
60 68parallel
Strand 3
A
89 97anti-parallel
Strand 4
A
226 239anti-parallel
Strand 5
A
207 220anti-parallel
Strand 6
A
176 187anti-parallel
Strand 7
A
169 171anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 389first strand
Strand 2
A
418 419parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
60 68parallel
Strand 3
B
89 97anti-parallel
Strand 4
B
226 239anti-parallel
Strand 5
B
208 220anti-parallel
Strand 6
B
176 186anti-parallel
Strand 7
B
127 132anti-parallel
Strand 8
B
153 156parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 22first strand
Strand 2
B
60 68parallel
Strand 3
B
89 97anti-parallel
Strand 4
B
226 239anti-parallel
Strand 5
B
208 220anti-parallel
Strand 6
B
176 186anti-parallel
Strand 7
B
169 171anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 71first strand
Strand 2
B
74 75anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
388 389first strand
Strand 2
B
418 419parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il