Analysis of interatomic Contacts of Structural Units in PDB entry:
3HYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HYH entry

There are 2 chains in PDB entry 3HYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 54LEU 315
B
 ASN 54LEU 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3HYH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
96 110Right-handed alpha
Helix 2
2
A
139 146Right-handed alpha
Helix 3
3
A
150 171Right-handed alpha
Helix 4
4
A
219 224Right-handed alpha
Helix 5
5
A
231 248Right-handed alpha
Helix 6
6
A
256 267Right-handed alpha
Helix 7
7
A
276 287Right-handed alpha
Helix 8
8
A
290 294Right-handed 310
Helix 9
9
A
296 303Right-handed alpha
Helix 10
10
A
303 308Right-handed alpha
Helix 11
11
A
311 315Right-handed 310
Helix 12
12
B
96 110Right-handed alpha
Helix 13
13
B
139 145Right-handed alpha
Helix 14
14
B
150 171Right-handed alpha
Helix 15
15
B
179 181Right-handed 310
Helix 16
16
B
219 224Right-handed alpha
Helix 17
17
B
231 248Right-handed alpha
Helix 18
18
B
256 267Right-handed alpha
Helix 19
19
B
276 287Right-handed alpha
Helix 20
20
B
296 302Right-handed alpha
Helix 21
21
B
303 308Right-handed alpha
Helix 22
22
B
311 315Right-handed 310
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There are 4 sheets in PDB entry 3HYH. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 62first strand
Strand 2
A
69 73anti-parallel
Strand 3
A
80 87anti-parallel
Strand 4
A
127 133anti-parallel
Strand 5
A
118 123anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
183 185anti-parallel
Strand 3
A
191 193anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 73first strand
Strand 2
B
80 86anti-parallel
Strand 3
B
128 133anti-parallel
Strand 4
B
118 123anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
183 185anti-parallel
Strand 3
B
191 193anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il