Analysis of interatomic Contacts of Structural Units in PDB entry:
3HZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3HZH entry

There are 3 chains in PDB entry 3HZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 13LEU 78
A
 ILE 80LYS 146
B
 ARG 2GLU 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3HZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 48Right-handed alpha
Helix 2
2
A
58 70Right-handed alpha
Helix 3
3
A
71 73Right-handed 310
Helix 4
4
A
86 98Right-handed alpha
Helix 5
5
A
111 121Right-handed alpha
Helix 6
6
A
132 143Right-handed alpha
Helix 7
7
B
5 21Right-handed alpha
Helix 8
8
B
62 75Right-handed alpha
Helix 9
9
B
85 108Right-handed alpha
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There are 3 sheets in PDB entry 3HZH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 56first strand
Strand 2
A
27 31parallel
Strand 3
A
75 78parallel
Strand 4
A
103 107parallel
Strand 5
A
125 128parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
138 144anti-parallel
Strand 3
B
150 157anti-parallel
Strand 4
B
55 61anti-parallel
Strand 5
B
43 51anti-parallel
Strand 6
B
116 118anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
138 144anti-parallel
Strand 3
B
150 157anti-parallel
Strand 4
B
55 61anti-parallel
Strand 5
B
43 51anti-parallel
Strand 6
B
122 124anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il