Analysis of interatomic Contacts of Structural Units in PDB entry:
3I0P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I0P entry

There is 1 chain in PDB entry 3I0P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5PHE 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3I0P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 25Right-handed alpha
Helix 2
2
A
28 46Right-handed alpha
Helix 3
3
A
51 53Right-handed 310
Helix 4
4
A
54 59Right-handed alpha
Helix 5
5
A
59 65Right-handed alpha
Helix 6
6
A
92 112Right-handed alpha
Helix 7
7
A
127 137Right-handed alpha
Helix 8
8
A
188 198Right-handed alpha
Helix 9
9
A
217 225Right-handed alpha
Helix 10
10
A
239 242Right-handed 310
Helix 11
11
A
243 260Right-handed alpha
Helix 12
12
A
268 278Right-handed alpha
Helix 13
13
A
292 294Right-handed 310
Helix 14
14
A
296 313Right-handed alpha
Helix 15
15
A
327 341Right-handed alpha
Helix 16
16
A
346 360Right-handed alpha
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There are 3 sheets in PDB entry 3I0P. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
342 345anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 79first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
113 121parallel
Strand 4
A
282 290anti-parallel
Strand 5
A
139 145anti-parallel
Strand 6
A
166 170anti-parallel
Strand 7
A
178 182anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
230 232anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il