Analysis of interatomic Contacts of Structural Units in PDB entry:
3I0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I0Z entry

There are 2 chains in PDB entry 3I0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0GLN 387
B
 GLY 0GLN 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 3I0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 12Right-handed alpha
Helix 2
2
A
14 23Right-handed alpha
Helix 3
3
A
23 53Right-handed alpha
Helix 4
4
A
64 81Right-handed alpha
Helix 5
5
A
92 97Right-handed alpha
Helix 6
6
A
99 104Right-handed alpha
Helix 7
7
A
121 135Right-handed alpha
Helix 8
8
A
149 154Right-handed alpha
Helix 9
9
A
167 171Right-handed 310
Helix 10
10
A
178 193Right-handed alpha
Helix 11
11
A
196 217Right-handed alpha
Helix 12
12
A
217 226Right-handed alpha
Helix 13
13
A
238 256Right-handed alpha
Helix 14
14
A
265 270Right-handed alpha
Helix 15
15
A
271 277Right-handed 310
Helix 16
16
A
290 308Right-handed alpha
Helix 17
17
A
338 341Right-handed 310
Helix 18
18
A
342 361Right-handed alpha
Helix 19
19
B
5 12Right-handed alpha
Helix 20
20
B
14 23Right-handed alpha
Helix 21
21
B
23 53Right-handed alpha
Helix 22
22
B
64 81Right-handed alpha
Helix 23
23
B
92 97Right-handed alpha
Helix 24
24
B
99 104Right-handed alpha
Helix 25
25
B
121 135Right-handed alpha
Helix 26
26
B
149 154Right-handed alpha
Helix 27
27
B
167 171Right-handed 310
Helix 28
28
B
178 193Right-handed alpha
Helix 29
29
B
196 217Right-handed alpha
Helix 30
30
B
217 226Right-handed alpha
Helix 31
31
B
239 255Right-handed alpha
Helix 32
32
B
265 270Right-handed alpha
Helix 33
33
B
271 277Right-handed 310
Helix 34
34
B
290 308Right-handed alpha
Helix 35
35
B
338 361Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3I0Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 90first strand
Strand 2
A
56 61parallel
Strand 3
A
109 116parallel
Strand 4
A
138 144parallel
Strand 5
A
161 165parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 264first strand
Strand 2
A
231 236parallel
Strand 3
A
281 286parallel
Strand 4
A
312 317parallel
Strand 5
A
327 330parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 90first strand
Strand 2
B
56 61parallel
Strand 3
B
109 116parallel
Strand 4
B
138 144parallel
Strand 5
B
161 165parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 264first strand
Strand 2
B
231 236parallel
Strand 3
B
281 286parallel
Strand 4
B
312 317parallel
Strand 5
B
327 330parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il