Analysis of interatomic Contacts of Structural Units in PDB entry:
3I27

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3I27 entry

There are 4 chains in PDB entry 3I27 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 16	GLU 384
B	THR 16	ASP 379
C	THR 16	PHE 378
D	THR 16	GLU 384

There are 36 helices in PDB entry 3I27. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	37	40	Right-handed 310
Helix 2	2	A	53	58	Right-handed 310
Helix 3	3	A	67	74	Right-handed alpha
Helix 4	4	A	101	105	Right-handed 310
Helix 5	5	A	111	132	Right-handed alpha
Helix 6	6	A	298	304	Right-handed alpha
Helix 7	7	A	331	338	Right-handed alpha
Helix 8	8	A	339	342	Right-handed 310
Helix 9	9	A	376	379	Right-handed 310
Helix 10	10	B	37	40	Right-handed 310
Helix 11	11	B	53	58	Right-handed 310
Helix 12	12	B	67	74	Right-handed alpha
Helix 13	13	B	101	105	Right-handed 310
Helix 14	14	B	111	132	Right-handed alpha
Helix 15	15	B	298	304	Right-handed alpha
Helix 16	16	B	331	338	Right-handed alpha
Helix 17	17	B	339	342	Right-handed 310
Helix 18	18	B	376	378	Right-handed 310
Helix 19	19	C	37	40	Right-handed 310
Helix 20	20	C	53	58	Right-handed 310
Helix 21	21	C	67	74	Right-handed alpha
Helix 22	22	C	101	105	Right-handed 310
Helix 23	23	C	111	132	Right-handed alpha
Helix 24	24	C	298	304	Right-handed alpha
Helix 25	25	C	331	338	Right-handed alpha
Helix 26	26	C	339	342	Right-handed 310
Helix 27	27	C	376	378	Right-handed 310
Helix 28	28	D	37	40	Right-handed 310
Helix 29	29	D	53	58	Right-handed 310
Helix 30	30	D	67	74	Right-handed alpha
Helix 31	31	D	101	105	Right-handed 310
Helix 32	32	D	111	132	Right-handed alpha
Helix 33	33	D	298	304	Right-handed alpha
Helix 34	34	D	331	338	Right-handed alpha
Helix 35	35	D	339	342	Right-handed 310
Helix 36	36	D	376	379	Right-handed 310

There are 36 sheets in PDB entry 3I27. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	62	first strand
Strand 2	A	31	35	parallel
Strand 3	A	91	95	parallel
Strand 4	A	283	286	parallel
Strand 5	A	309	312	parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	86	88	first strand
Strand 2	A	136	141	anti-parallel
Strand 3	A	270	274	anti-parallel
Strand 4	A	194	202	anti-parallel
Strand 5	A	244	251	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	167	171	anti-parallel
Strand 3	A	264	267	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	183	first strand
Strand 2	A	254	260	anti-parallel
Strand 3	A	216	222	anti-parallel
Strand 4	A	225	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	209	first strand
Strand 2	A	212	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	320	325	first strand
Strand 2	A	328	330	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	353	first strand
Strand 2	A	346	348	anti-parallel
Strand 3	A	368	369	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	359	first strand
Strand 2	A	373	374	parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	60	62	first strand
Strand 2	B	31	35	parallel
Strand 3	B	91	95	parallel
Strand 4	B	283	286	parallel
Strand 5	B	309	312	parallel

Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	86	88	first strand
Strand 2	B	136	141	anti-parallel
Strand 3	B	270	274	anti-parallel
Strand 4	B	194	202	anti-parallel
Strand 5	B	244	251	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	153	first strand
Strand 2	B	167	171	anti-parallel
Strand 3	B	264	267	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	183	first strand
Strand 2	B	254	260	anti-parallel
Strand 3	B	216	222	anti-parallel
Strand 4	B	225	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	209	first strand
Strand 2	B	212	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	320	325	first strand
Strand 2	B	328	330	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	351	353	first strand
Strand 2	B	346	348	anti-parallel
Strand 3	B	368	369	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	359	first strand
Strand 2	B	373	374	parallel

Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	62	first strand
Strand 2	C	31	35	parallel
Strand 3	C	91	95	parallel
Strand 4	C	283	286	parallel
Strand 5	C	309	312	parallel

Back to list of sheets
Back to top of page

There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	86	88	first strand
Strand 2	C	136	141	anti-parallel
Strand 3	C	270	274	anti-parallel
Strand 4	C	194	202	anti-parallel
Strand 5	C	244	251	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	152	153	first strand
Strand 2	C	167	170	anti-parallel
Strand 3	C	264	267	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	183	first strand
Strand 2	C	254	260	anti-parallel
Strand 3	C	216	221	anti-parallel
Strand 4	C	226	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	209	first strand
Strand 2	C	212	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	320	325	first strand
Strand 2	C	328	330	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	351	353	first strand
Strand 2	C	346	348	anti-parallel
Strand 3	C	368	369	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	C	373	374	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	60	62	first strand
Strand 2	D	31	35	parallel
Strand 3	D	91	95	parallel
Strand 4	D	283	286	parallel
Strand 5	D	309	312	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	86	88	first strand
Strand 2	D	136	141	anti-parallel
Strand 3	D	270	274	anti-parallel
Strand 4	D	194	202	anti-parallel
Strand 5	D	244	251	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	151	153	first strand
Strand 2	D	167	171	anti-parallel
Strand 3	D	264	267	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	177	183	first strand
Strand 2	D	254	260	anti-parallel
Strand 3	D	216	222	anti-parallel
Strand 4	D	225	231	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	190	191	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	208	first strand
Strand 2	D	213	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	320	325	first strand
Strand 2	D	328	330	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	351	353	first strand
Strand 2	D	346	348	anti-parallel
Strand 3	D	368	369	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	358	359	first strand
Strand 2	D	373	374	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3I27

Analysis of interatomic Contacts of Structural Units in PDB entry:
3I27