Analysis of interatomic Contacts of Structural Units in PDB entry:
3I4N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I4N entry

There are 17 chains in PDB entry 3I4N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 2PRO 1455
B
ASP 20PHE 1224
C
MET 1VAL 270
D
MET 1TYR 221
E
ASP 2MET 215
F
THR 68LEU 155
G
MET 1ILE 171
H
MET 1ARG 146
I
MET 1LYS 117
J
MET 1PRO 65
K
MET 1ALA 116
L
THR 24ARG 70
T
C 7 A 18
T
G 20 C 22
T
G 24 T 26
N
A 1 C 11
P
U 2 U 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are133 helices in PDB entry 3I4N. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
25 31Right-handed alpha
Helix 2
2
A
95 104Right-handed alpha
Helix 3
3
A
119 126Right-handed alpha
Helix 4
4
A
132 143Right-handed alpha
Helix 5
5
A
203 213Right-handed alpha
Helix 6
6
A
215 222Right-handed alpha
Helix 7
7
A
230 233Right-handed 310
Helix 8
8
A
243 247Right-handed 310
Helix 9
9
A
260 281Right-handed alpha
Helix 10
10
A
289 303Right-handed alpha
Helix 11
11
A
324 330Right-handed alpha
Helix 12
12
A
368 374Right-handed alpha
Helix 13
13
A
384 394Right-handed alpha
Helix 14
14
A
474 479Right-handed alpha
Helix 15
15
A
494 503Right-handed alpha
Helix 16
16
A
506 511Right-handed alpha
Helix 17
17
A
524 536Right-handed alpha
Helix 18
18
A
543 553Right-handed alpha
Helix 19
19
A
574 579Right-handed alpha
Helix 20
20
A
628 637Right-handed alpha
Helix 21
21
A
638 661Right-handed alpha
Helix 22
22
A
665 670Right-handed 310
Helix 23
23
A
672 696Right-handed alpha
Helix 24
24
A
709 735Right-handed alpha
Helix 25
25
A
741 750Right-handed alpha
Helix 26
26
A
754 763Right-handed alpha
Helix 27
27
A
793 798Right-handed alpha
Helix 28
28
A
809 844Right-handed alpha
Helix 29
29
A
867 872Right-handed alpha
Helix 30
30
A
889 898Right-handed alpha
Helix 31
31
A
916 920Right-handed 310
Helix 32
32
A
924 947Right-handed alpha
Helix 33
33
A
959 971Right-handed alpha
Helix 34
34
A
982 996Right-handed alpha
Helix 35
35
A
1004 1016Right-handed alpha
Helix 36
36
A
1016 1026Right-handed alpha
Helix 37
37
A
1027 1033Right-handed alpha
Helix 38
38
A
1038 1056Right-handed alpha
Helix 39
39
A
1063 1078Right-handed alpha
Helix 40
40
A
1097 1106Right-handed alpha
Helix 41
41
A
1127 1137Right-handed alpha
Helix 42
42
A
1143 1146Right-handed alpha
Helix 43
43
A
1167 1172Right-handed alpha
Helix 44
44
A
1200 1204Right-handed 310
Helix 45
45
A
1208 1221Right-handed alpha
Helix 46
46
A
1255 1260Right-handed alpha
Helix 47
47
A
1261 1270Right-handed alpha
Helix 48
48
A
1312 1317Right-handed alpha
Helix 49
49
A
1331 1339Right-handed alpha
Helix 50
50
A
1341 1357Right-handed alpha
Helix 51
51
A
1365 1378Right-handed alpha
Helix 52
52
A
1388 1392Right-handed 310
Helix 53
53
A
1395 1400Right-handed alpha
Helix 54
54
A
1404 1415Right-handed alpha
Helix 55
55
A
1423 1431Right-handed alpha
Helix 56
56
A
1436 1439Right-handed 310
Helix 57
57
A
1448 1453Right-handed alpha
Helix 58
58
B
26 41Right-handed alpha
Helix 59
59
B
44 57Right-handed alpha
Helix 60
60
B
57 62Right-handed alpha
Helix 61
61
B
113 120Right-handed alpha
Helix 62
62
B
179 184Right-handed alpha
Helix 63
63
B
185 193Right-handed alpha
Helix 64
64
B
282 290Right-handed alpha
Helix 65
65
B
296 302Right-handed alpha
Helix 66
66
B
307 321Right-handed alpha
Helix 67
67
B
322 324Right-handed 310
Helix 68
68
B
328 333Right-handed alpha
Helix 69
69
B
346 359Right-handed alpha
Helix 70
70
B
370 390Right-handed alpha
Helix 71
71
B
400 402Right-handed 310
Helix 72
72
B
408 426Right-handed alpha
Helix 73
73
B
428 433Right-handed alpha
Helix 74
74
B
450 463Right-handed alpha
Helix 75
75
B
487 496Right-handed alpha
Helix 76
76
B
551 559Right-handed alpha
Helix 77
77
B
567 569Right-handed 310
Helix 78
78
B
593 605Right-handed alpha
Helix 79
79
B
654 667Right-handed alpha
Helix 80
80
B
682 687Right-handed alpha
Helix 81
81
B
695 699Right-handed alpha
Helix 82
82
B
744 749Right-handed 310
Helix 83
83
B
750 755Right-handed alpha
Helix 84
84
B
758 762Right-handed 310
Helix 85
85
B
765 774Right-handed alpha
Helix 86
86
B
784 788Right-handed 310
Helix 87
87
B
808 813Right-handed alpha
Helix 88
88
B
843 848Right-handed alpha
Helix 89
89
B
1014 1017Right-handed 310
Helix 90
90
B
1022 1035Right-handed alpha
Helix 91
91
B
1051 1062Right-handed alpha
Helix 92
92
B
1098 1102Right-handed 310
Helix 93
93
B
1121 1125Right-handed 310
Helix 94
94
B
1131 1142Right-handed alpha
Helix 95
95
B
1143 1152Right-handed alpha
Helix 96
96
B
1197 1209Right-handed alpha
Helix 97
97
C
26 39Right-handed alpha
Helix 98
98
C
59 70Right-handed alpha
Helix 99
99
C
76 80Right-handed 310
Helix 100
100
C
116 118Right-handed 310
Helix 101
101
C
167 171Right-handed 310
Helix 102
102
C
196 201Right-handed alpha
Helix 103
103
C
204 208Right-handed 310
Helix 104
104
C
241 268Right-handed alpha
Helix 105
105
D
30 34Right-handed 310
Helix 106
106
D
53 69Right-handed alpha
Helix 107
107
D
121 134Right-handed alpha
Helix 108
108
D
138 151Right-handed alpha
Helix 109
109
D
156 168Right-handed alpha
Helix 110
110
D
173 183Right-handed alpha
Helix 111
111
D
187 195Right-handed alpha
Helix 112
112
D
203 218Right-handed alpha
Helix 113
113
E
5 26Right-handed alpha
Helix 114
114
E
31 36Right-handed alpha
Helix 115
115
E
39 44Right-handed alpha
Helix 116
116
E
54 58Right-handed 310
Helix 117
117
E
67 72Right-handed alpha
Helix 118
118
E
89 103Right-handed alpha
Helix 119
119
E
157 167Right-handed alpha
Helix 120
120
E
182 188Right-handed alpha
Helix 121
121
F
86 103Right-handed alpha
Helix 122
122
F
116 125Right-handed alpha
Helix 123
123
G
14 18Right-handed 310
Helix 124
124
G
21 33Right-handed alpha
Helix 125
125
G
113 115Right-handed 310
Helix 126
126
I
59 64Right-handed 310
Helix 127
127
J
16 27Right-handed alpha
Helix 128
128
J
31 39Right-handed alpha
Helix 129
129
J
43 53Right-handed alpha
Helix 130
130
J
56 62Right-handed alpha
Helix 131
131
K
5 10Right-handed 310
Helix 132
132
K
42 51Right-handed alpha
Helix 133
133
K
82 111Right-handed alpha
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There are 49 sheets in PDB entry 3I4N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1418 1419first strand
Strand 2
A
16 21anti-parallel
Strand 3
B
1212 1217anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
85 91first strand
Strand 2
A
235 238anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
151 152first strand
Strand 2
A
162 163anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
173 177first strand
Strand 2
A
180 184anti-parallel
Strand 3
A
199 202anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
469 470first strand
Strand 2
A
363 367anti-parallel
Strand 3
A
455 463parallel
Strand 4
A
442 445anti-parallel
Strand 5
A
486 490anti-parallel
Strand 6
A
348 352anti-parallel
Strand 7
B
1104 1106anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
411 414first strand
Strand 2
A
402 407anti-parallel
Strand 3
A
431 434anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
512 513first strand
Strand 2
A
518 519anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
540 542first strand
Strand 2
A
571 573anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
588 589first strand
Strand 2
A
605 608anti-parallel
Strand 3
A
611 615anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
766 767first strand
Strand 2
A
799 800anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
849 851first strand
Strand 2
A
855 857anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
879 882first strand
Strand 2
A
953 956anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1118 1119first strand
Strand 2
A
1303 1306anti-parallel
Strand 3
A
1286 1287anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1141 1142first strand
Strand 2
A
1272 1274anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1237 1238first strand
Strand 2
A
1191 1197anti-parallel
Strand 3
A
1147 1154anti-parallel
Strand 4
I
42 45anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1225 1226first strand
Strand 2
A
1240 1241anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1290 1292first strand
Strand 2
A
1298 1300anti-parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
143 147first strand
Strand 2
F
132 137anti-parallel
Strand 3
A
1441 1445anti-parallel
Strand 4
G
59 61anti-parallel
Strand 5
G
68 79anti-parallel
Strand 6
G
3 13anti-parallel
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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
143 147first strand
Strand 2
F
132 137anti-parallel
Strand 3
A
1441 1445anti-parallel
Strand 4
G
59 61anti-parallel
Strand 5
G
68 79anti-parallel
Strand 6
G
43 48anti-parallel
Strand 7
G
38 39anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
92 97first strand
Strand 2
B
126 132anti-parallel
Strand 3
B
165 170anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
203 204first strand
Strand 2
B
209 210anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
404 407first strand
Strand 2
B
214 218anti-parallel
Strand 3
B
497 499parallel
Strand 4
B
537 538anti-parallel
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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
223 227first strand
Strand 2
B
236 243anti-parallel
Strand 3
B
251 256anti-parallel
Strand 4
B
270 272anti-parallel
Strand 5
B
279 281anti-parallel
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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
633 639anti-parallel
Strand 3
B
690 694anti-parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
544 545first strand
Strand 2
B
633 639anti-parallel
Strand 3
B
740 741anti-parallel
Strand 4
B
703 704parallel
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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
564 565first strand
Strand 2
B
585 589anti-parallel
Strand 3
B
580 582anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
614 618first strand
Strand 2
B
623 627anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
821 827first strand
Strand 2
B
1080 1092anti-parallel
Strand 3
B
1070 1073anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
979 980first strand
Strand 2
B
988 994anti-parallel
Strand 3
B
838 842parallel
Strand 4
B
1010 1012anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
856 861first strand
Strand 2
B
963 969anti-parallel
Strand 3
B
948 955anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
910 912first strand
Strand 2
B
939 940anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
915 916first strand
Strand 2
B
935 936anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1158 1163first strand
Strand 2
B
1191 1196anti-parallel
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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
18 22first strand
Strand 2
C
228 232anti-parallel
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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 49first strand
Strand 2
C
152 160anti-parallel
Strand 3
C
53 54anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 49first strand
Strand 2
C
152 160anti-parallel
Strand 3
C
97 104anti-parallel
Strand 4
C
119 120anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
111 114first strand
Strand 2
C
143 147anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
36 38first strand
Strand 2
D
44 46anti-parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
60 62first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
107 112parallel
Strand 4
E
131 132parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
60 62first strand
Strand 2
E
78 82anti-parallel
Strand 3
E
107 112parallel
Strand 4
E
135 136parallel
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There are 3 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
177 178first strand
Strand 2
E
207 214parallel
Strand 3
E
195 201anti-parallel
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There are 6 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
86 87first strand
Strand 2
G
143 153anti-parallel
Strand 3
G
156 162anti-parallel
Strand 4
G
106 111parallel
Strand 5
G
98 103anti-parallel
Strand 6
G
90 95anti-parallel
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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
86 87first strand
Strand 2
G
143 153anti-parallel
Strand 3
G
169 170anti-parallel
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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
130 131first strand
Strand 2
G
136 137anti-parallel
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There are 6 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
123 124first strand
Strand 2
H
38 40anti-parallel
Strand 3
H
25 30anti-parallel
Strand 4
H
6 16anti-parallel
Strand 5
H
54 60anti-parallel
Strand 6
H
141 143anti-parallel
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There are 2 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
100 106first strand
Strand 2
H
112 117anti-parallel
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There are 3 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
15 18first strand
Strand 2
I
25 28anti-parallel
Strand 3
I
35 37anti-parallel
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There are 2 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
100 101first strand
Strand 2
I
110 111anti-parallel
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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
21 23first strand
Strand 2
K
30 36anti-parallel
Strand 3
K
70 77anti-parallel
Strand 4
K
56 62anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il