Analysis of interatomic Contacts of Structural Units in PDB entry:
3I5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I5H entry

There are 3 chains in PDB entry 3I5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 839
B
 ARG 7ASP 151
C
 SER 1ASP 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 3I5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 12Right-handed 310
Helix 2
2
A
16 25Right-handed alpha
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
87 91Right-handed 310
Helix 6
6
A
95 108Right-handed alpha
Helix 7
7
A
133 141Right-handed alpha
Helix 8
8
A
144 148Right-handed 310
Helix 9
9
A
151 167Right-handed alpha
Helix 10
10
A
177 180Right-handed 310
Helix 11
11
A
181 198Right-handed alpha
Helix 12
12
A
219 226Right-handed alpha
Helix 13
13
A
227 236Right-handed alpha
Helix 14
14
A
273 278Right-handed 310
Helix 15
15
A
287 294Right-handed alpha
Helix 16
16
A
298 305Right-handed alpha
Helix 17
17
A
310 314Right-handed 310
Helix 18
18
A
328 343Right-handed alpha
Helix 19
19
A
348 364Right-handed alpha
Helix 20
20
A
380 391Right-handed alpha
Helix 21
21
A
393 403Right-handed alpha
Helix 22
22
A
418 450Right-handed alpha
Helix 23
23
A
474 505Right-handed alpha
Helix 24
24
A
516 525Right-handed alpha
Helix 25
25
A
531 539Right-handed alpha
Helix 26
26
A
546 559Right-handed alpha
Helix 27
27
A
595 600Right-handed alpha
Helix 28
28
A
605 612Right-handed alpha
Helix 29
29
A
616 624Right-handed alpha
Helix 30
30
A
646 663Right-handed alpha
Helix 31
31
A
685 697Right-handed alpha
Helix 32
32
A
697 707Right-handed alpha
Helix 33
33
A
715 723Right-handed alpha
Helix 34
34
A
724 726Right-handed 310
Helix 35
35
A
736 749Right-handed alpha
Helix 36
36
A
751 753Right-handed 310
Helix 37
37
A
767 824Right-handed alpha
Helix 38
38
A
826 832Right-handed alpha
Helix 39
39
B
11 17Right-handed alpha
Helix 40
40
B
18 26Right-handed alpha
Helix 41
41
B
34 42Right-handed alpha
Helix 42
42
B
50 57Right-handed alpha
Helix 43
43
B
67 73Right-handed alpha
Helix 44
44
B
74 79Right-handed alpha
Helix 45
45
B
83 93Right-handed alpha
Helix 46
46
B
103 112Right-handed alpha
Helix 47
47
B
119 130Right-handed alpha
Helix 48
48
B
138 148Right-handed alpha
Helix 49
49
C
4 22Right-handed alpha
Helix 50
50
C
32 40Right-handed alpha
Helix 51
51
C
45 51Right-handed alpha
Helix 52
52
C
64 76Right-handed alpha
Helix 53
53
C
83 93Right-handed alpha
Helix 54
54
C
103 114Right-handed alpha
Helix 55
55
C
119 130Right-handed alpha
Helix 56
56
C
142 152Right-handed alpha
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There are 8 sheets in PDB entry 3I5H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 37first strand
Strand 2
A
43 50anti-parallel
Strand 3
A
56 60anti-parallel
Strand 4
A
66 69anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
119 123anti-parallel
Strand 3
A
669 673parallel
Strand 4
A
170 175parallel
Strand 5
A
457 463parallel
Strand 6
A
249 257anti-parallel
Strand 7
A
261 270anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
375 377anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
580 584first strand
Strand 2
A
587 591anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 714first strand
Strand 2
A
761 764anti-parallel
Strand 3
A
755 757anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
136 137anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 29first strand
Strand 2
C
62 63anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
101 102first strand
Strand 2
C
140 141anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il