Analysis of interatomic Contacts of Structural Units in PDB entry:
3I5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I5T entry

There are 2 chains in PDB entry 3I5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10THR 458
B
 ALA 10LEU 457
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 3I5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 19Right-handed alpha
Helix 2
2
A
25 29Right-handed 310
Helix 3
3
A
57 62Right-handed alpha
Helix 4
4
A
69 83Right-handed alpha
Helix 5
5
A
93 105Right-handed alpha
Helix 6
6
A
119 138Right-handed alpha
Helix 7
7
A
157 163Right-handed alpha
Helix 8
8
A
166 170Right-handed 310
Helix 9
9
A
187 191Right-handed 310
Helix 10
10
A
195 215Right-handed alpha
Helix 11
11
A
239 251Right-handed alpha
Helix 12
12
A
271 276Right-handed alpha
Helix 13
13
A
287 292Right-handed 310
Helix 14
14
A
303 309Right-handed alpha
Helix 15
15
A
310 315Right-handed 310
Helix 16
16
A
329 346Right-handed alpha
Helix 17
17
A
347 365Right-handed alpha
Helix 18
18
A
396 413Right-handed alpha
Helix 19
19
A
433 455Right-handed alpha
Helix 20
20
B
10 19Right-handed alpha
Helix 21
21
B
25 29Right-handed 310
Helix 22
22
B
57 62Right-handed alpha
Helix 23
23
B
69 83Right-handed alpha
Helix 24
24
B
93 105Right-handed alpha
Helix 25
25
B
119 138Right-handed alpha
Helix 26
26
B
157 163Right-handed alpha
Helix 27
27
B
166 170Right-handed 310
Helix 28
28
B
187 191Right-handed 310
Helix 29
29
B
195 215Right-handed alpha
Helix 30
30
B
239 251Right-handed alpha
Helix 31
31
B
271 276Right-handed alpha
Helix 32
32
B
287 292Right-handed 310
Helix 33
33
B
303 309Right-handed alpha
Helix 34
34
B
310 315Right-handed 310
Helix 35
35
B
329 346Right-handed alpha
Helix 36
36
B
347 365Right-handed alpha
Helix 37
37
B
396 413Right-handed alpha
Helix 38
38
B
433 455Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3I5T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
44 47anti-parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
415 416parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 117first strand
Strand 2
A
298 302anti-parallel
Strand 3
A
283 286anti-parallel
Strand 4
A
254 258parallel
Strand 5
A
219 224parallel
Strand 6
A
145 149parallel
Strand 7
A
180 183parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
372 378first strand
Strand 2
A
381 386anti-parallel
Strand 3
A
423 426anti-parallel
Strand 4
A
418 420anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
44 47anti-parallel
Strand 3
B
52 55anti-parallel
Strand 4
B
415 416parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
113 117first strand
Strand 2
B
298 302anti-parallel
Strand 3
B
283 286anti-parallel
Strand 4
B
254 258parallel
Strand 5
B
219 224parallel
Strand 6
B
145 149parallel
Strand 7
B
180 183parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
372 378first strand
Strand 2
B
381 386anti-parallel
Strand 3
B
423 426anti-parallel
Strand 4
B
418 420anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il