Analysis of interatomic Contacts of Structural Units in PDB entry:
3I6E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3I6E entry

There are 8 chains in PDB entry 3I6E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 6	ARG 375
B	LEU 6	ARG 375
C	LEU 6	ARG 375
D	LEU 6	ARG 375
E	LEU 6	ARG 375
F	LEU 6	ARG 375
G	LEU 6	ARG 375
H	LEU 6	ARG 375

There are135 helices in PDB entry 3I6E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	65	76	Right-handed alpha
Helix 2	2	A	77	82	Right-handed alpha
Helix 3	3	A	85	87	Right-handed 310
Helix 4	4	A	88	100	Right-handed alpha
Helix 5	5	A	103	123	Right-handed alpha
Helix 6	6	A	125	130	Right-handed alpha
Helix 7	7	A	148	163	Right-handed alpha
Helix 8	8	A	175	190	Right-handed alpha
Helix 9	9	A	204	206	Right-handed 310
Helix 10	10	A	207	217	Right-handed alpha
Helix 11	11	A	231	240	Right-handed alpha
Helix 12	12	A	254	265	Right-handed alpha
Helix 13	13	A	273	278	Right-handed alpha
Helix 14	14	A	279	293	Right-handed alpha
Helix 15	15	A	305	318	Right-handed alpha
Helix 16	16	A	329	334	Right-handed alpha
Helix 17	17	A	364	371	Right-handed alpha
Helix 18	18	B	65	75	Right-handed alpha
Helix 19	19	B	77	82	Right-handed alpha
Helix 20	20	B	85	87	Right-handed 310
Helix 21	21	B	88	100	Right-handed alpha
Helix 22	22	B	103	123	Right-handed alpha
Helix 23	23	B	125	130	Right-handed 310
Helix 24	24	B	148	163	Right-handed alpha
Helix 25	25	B	175	190	Right-handed alpha
Helix 26	26	B	204	206	Right-handed 310
Helix 27	27	B	207	217	Right-handed alpha
Helix 28	28	B	231	240	Right-handed alpha
Helix 29	29	B	254	264	Right-handed alpha
Helix 30	30	B	273	278	Right-handed alpha
Helix 31	31	B	279	293	Right-handed alpha
Helix 32	32	B	305	318	Right-handed alpha
Helix 33	33	B	329	334	Right-handed alpha
Helix 34	34	B	364	371	Right-handed alpha
Helix 35	35	C	65	75	Right-handed alpha
Helix 36	36	C	77	82	Right-handed alpha
Helix 37	37	C	85	87	Right-handed 310
Helix 38	38	C	88	100	Right-handed alpha
Helix 39	39	C	103	123	Right-handed alpha
Helix 40	40	C	125	130	Right-handed 310
Helix 41	41	C	148	163	Right-handed alpha
Helix 42	42	C	175	190	Right-handed alpha
Helix 43	43	C	204	206	Right-handed 310
Helix 44	44	C	207	217	Right-handed alpha
Helix 45	45	C	231	240	Right-handed alpha
Helix 46	46	C	254	265	Right-handed alpha
Helix 47	47	C	273	278	Right-handed alpha
Helix 48	48	C	279	293	Right-handed alpha
Helix 49	49	C	305	318	Right-handed alpha
Helix 50	50	C	329	334	Right-handed alpha
Helix 51	51	C	364	371	Right-handed alpha
Helix 52	52	D	65	75	Right-handed alpha
Helix 53	53	D	77	82	Right-handed alpha
Helix 54	54	D	85	87	Right-handed 310
Helix 55	55	D	88	100	Right-handed alpha
Helix 56	56	D	103	122	Right-handed alpha
Helix 57	57	D	125	130	Right-handed 310
Helix 58	58	D	148	163	Right-handed alpha
Helix 59	59	D	175	190	Right-handed alpha
Helix 60	60	D	204	206	Right-handed 310
Helix 61	61	D	207	217	Right-handed alpha
Helix 62	62	D	231	240	Right-handed alpha
Helix 63	63	D	254	265	Right-handed alpha
Helix 64	64	D	273	278	Right-handed alpha
Helix 65	65	D	279	293	Right-handed alpha
Helix 66	66	D	305	318	Right-handed alpha
Helix 67	67	D	329	334	Right-handed alpha
Helix 68	68	D	364	371	Right-handed alpha
Helix 69	69	E	65	76	Right-handed alpha
Helix 70	70	E	77	82	Right-handed alpha
Helix 71	71	E	85	87	Right-handed 310
Helix 72	72	E	88	100	Right-handed alpha
Helix 73	73	E	103	123	Right-handed alpha
Helix 74	74	E	125	130	Right-handed 310
Helix 75	75	E	148	162	Right-handed alpha
Helix 76	76	E	175	190	Right-handed alpha
Helix 77	77	E	204	206	Right-handed 310
Helix 78	78	E	207	217	Right-handed alpha
Helix 79	79	E	231	240	Right-handed alpha
Helix 80	80	E	254	265	Right-handed alpha
Helix 81	81	E	273	278	Right-handed alpha
Helix 82	82	E	279	293	Right-handed alpha
Helix 83	83	E	305	318	Right-handed alpha
Helix 84	84	E	329	334	Right-handed alpha
Helix 85	85	E	364	371	Right-handed alpha
Helix 86	86	F	65	75	Right-handed alpha
Helix 87	87	F	77	82	Right-handed alpha
Helix 88	88	F	85	87	Right-handed 310
Helix 89	89	F	88	100	Right-handed alpha
Helix 90	90	F	103	123	Right-handed alpha
Helix 91	91	F	125	130	Right-handed 310
Helix 92	92	F	148	163	Right-handed alpha
Helix 93	93	F	175	190	Right-handed alpha
Helix 94	94	F	204	206	Right-handed 310
Helix 95	95	F	207	217	Right-handed alpha
Helix 96	96	F	231	240	Right-handed alpha
Helix 97	97	F	254	264	Right-handed alpha
Helix 98	98	F	273	278	Right-handed alpha
Helix 99	99	F	279	293	Right-handed alpha
Helix 100	100	F	305	318	Right-handed alpha
Helix 101	101	F	329	334	Right-handed alpha
Helix 102	102	F	364	371	Right-handed alpha
Helix 103	103	G	65	75	Right-handed alpha
Helix 104	104	G	77	82	Right-handed alpha
Helix 105	105	G	85	87	Right-handed 310
Helix 106	106	G	88	100	Right-handed alpha
Helix 107	107	G	103	123	Right-handed alpha
Helix 108	108	G	125	130	Right-handed 310
Helix 109	109	G	148	163	Right-handed alpha
Helix 110	110	G	175	190	Right-handed alpha
Helix 111	111	G	207	217	Right-handed alpha
Helix 112	112	G	231	240	Right-handed alpha
Helix 113	113	G	254	265	Right-handed alpha
Helix 114	114	G	273	278	Right-handed alpha
Helix 115	115	G	279	293	Right-handed alpha
Helix 116	116	G	305	318	Right-handed alpha
Helix 117	117	G	329	334	Right-handed alpha
Helix 118	118	G	364	371	Right-handed alpha
Helix 119	119	H	65	75	Right-handed alpha
Helix 120	120	H	77	82	Right-handed alpha
Helix 121	121	H	85	87	Right-handed 310
Helix 122	122	H	88	100	Right-handed alpha
Helix 123	123	H	103	123	Right-handed alpha
Helix 124	124	H	125	130	Right-handed 310
Helix 125	125	H	148	162	Right-handed alpha
Helix 126	126	H	175	190	Right-handed alpha
Helix 127	127	H	204	206	Right-handed 310
Helix 128	128	H	207	217	Right-handed alpha
Helix 129	129	H	231	242	Right-handed alpha
Helix 130	130	H	254	264	Right-handed alpha
Helix 131	131	H	273	278	Right-handed alpha
Helix 132	132	H	279	293	Right-handed alpha
Helix 133	133	H	305	318	Right-handed alpha
Helix 134	134	H	329	334	Right-handed alpha
Helix 135	135	H	364	371	Right-handed alpha

There are 24 sheets in PDB entry 3I6E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	51	56	first strand
Strand 2	A	38	46	anti-parallel
Strand 3	A	10	19	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	137	139	first strand
Strand 2	A	350	352	anti-parallel
Strand 3	A	346	347	anti-parallel

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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	141	144	first strand
Strand 2	A	166	170	parallel
Strand 3	A	194	198	parallel
Strand 4	A	223	224	parallel
Strand 5	A	246	248	parallel
Strand 6	A	269	272	parallel
Strand 7	A	296	299	parallel
Strand 8	A	322	326	parallel

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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	56	first strand
Strand 2	B	38	46	anti-parallel
Strand 3	B	10	19	anti-parallel
Strand 4	B	372	374	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	139	first strand
Strand 2	B	350	352	anti-parallel
Strand 3	B	346	347	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	141	144	first strand
Strand 2	B	166	170	parallel
Strand 3	B	194	198	parallel
Strand 4	B	223	224	parallel
Strand 5	B	246	248	parallel
Strand 6	B	269	272	parallel
Strand 7	B	296	299	parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	51	56	first strand
Strand 2	C	38	46	anti-parallel
Strand 3	C	10	19	anti-parallel
Strand 4	C	372	374	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	137	139	first strand
Strand 2	C	350	352	anti-parallel
Strand 3	C	346	347	anti-parallel

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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	141	144	first strand
Strand 2	C	166	170	parallel
Strand 3	C	194	198	parallel
Strand 4	C	223	224	parallel
Strand 5	C	246	248	parallel
Strand 6	C	269	272	parallel
Strand 7	C	296	299	parallel
Strand 8	C	322	326	parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	56	first strand
Strand 2	D	38	46	anti-parallel
Strand 3	D	10	19	anti-parallel
Strand 4	D	372	374	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	137	139	first strand
Strand 2	D	350	352	anti-parallel
Strand 3	D	346	347	anti-parallel

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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	141	144	first strand
Strand 2	D	166	170	parallel
Strand 3	D	194	198	parallel
Strand 4	D	223	224	parallel
Strand 5	D	246	248	parallel
Strand 6	D	269	272	parallel
Strand 7	D	296	299	parallel
Strand 8	D	322	326	parallel

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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	56	first strand
Strand 2	E	38	46	anti-parallel
Strand 3	E	10	19	anti-parallel
Strand 4	E	372	374	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	137	139	first strand
Strand 2	E	350	352	anti-parallel
Strand 3	E	346	347	anti-parallel

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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	141	144	first strand
Strand 2	E	166	170	parallel
Strand 3	E	194	198	parallel
Strand 4	E	223	224	parallel
Strand 5	E	246	248	parallel
Strand 6	E	269	272	parallel
Strand 7	E	296	299	parallel
Strand 8	E	322	326	parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	56	first strand
Strand 2	F	38	46	anti-parallel
Strand 3	F	10	19	anti-parallel
Strand 4	F	372	374	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	137	139	first strand
Strand 2	F	350	352	anti-parallel
Strand 3	F	346	347	anti-parallel

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There are 8 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	141	144	first strand
Strand 2	F	166	170	parallel
Strand 3	F	194	198	parallel
Strand 4	F	223	224	parallel
Strand 5	F	246	248	parallel
Strand 6	F	269	272	parallel
Strand 7	F	296	299	parallel
Strand 8	F	322	326	parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	51	56	first strand
Strand 2	G	38	46	anti-parallel
Strand 3	G	10	19	anti-parallel
Strand 4	G	372	374	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	137	139	first strand
Strand 2	G	350	352	anti-parallel
Strand 3	G	346	347	anti-parallel

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There are 7 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	141	144	first strand
Strand 2	G	166	170	parallel
Strand 3	G	194	198	parallel
Strand 4	G	223	224	parallel
Strand 5	G	246	248	parallel
Strand 6	G	269	272	parallel
Strand 7	G	296	299	parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	56	first strand
Strand 2	H	38	46	anti-parallel
Strand 3	H	10	19	anti-parallel
Strand 4	H	372	374	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	137	139	first strand
Strand 2	H	350	352	anti-parallel
Strand 3	H	346	347	anti-parallel

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There are 8 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	141	144	first strand
Strand 2	H	166	170	parallel
Strand 3	H	194	198	parallel
Strand 4	H	223	224	parallel
Strand 5	H	246	248	parallel
Strand 6	H	269	272	parallel
Strand 7	H	296	299	parallel
Strand 8	H	322	326	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3I6E

Analysis of interatomic Contacts of Structural Units in PDB entry:
3I6E