Analysis of interatomic Contacts of Structural Units in PDB entry:
3I6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I6S entry

There are 2 chains in PDB entry 3I6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 113TRP 761
B
 THR 113TRP 761
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 3I6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
115 120Right-handed alpha
Helix 2
2
A
127 133Right-handed alpha
Helix 3
3
A
134 136Right-handed 310
Helix 4
4
A
151 155Right-handed 310
Helix 5
5
A
192 199Right-handed alpha
Helix 6
6
A
214 225Right-handed alpha
Helix 7
7
A
262 276Right-handed alpha
Helix 8
8
A
291 294Right-handed 310
Helix 9
9
A
295 307Right-handed alpha
Helix 10
10
A
384 389Right-handed alpha
Helix 11
11
A
393 396Right-handed 310
Helix 12
12
A
406 418Right-handed alpha
Helix 13
13
A
428 434Right-handed 310
Helix 14
14
A
445 458Right-handed alpha
Helix 15
15
A
536 555Right-handed alpha
Helix 16
16
A
559 570Right-handed alpha
Helix 17
17
A
591 596Right-handed alpha
Helix 18
18
A
601 606Right-handed alpha
Helix 19
19
A
615 625Right-handed alpha
Helix 20
20
A
629 638Right-handed alpha
Helix 21
21
B
115 120Right-handed alpha
Helix 22
22
B
127 133Right-handed alpha
Helix 23
23
B
134 136Right-handed 310
Helix 24
24
B
151 155Right-handed 310
Helix 25
25
B
192 199Right-handed alpha
Helix 26
26
B
214 225Right-handed alpha
Helix 27
27
B
262 276Right-handed alpha
Helix 28
28
B
291 294Right-handed 310
Helix 29
29
B
295 307Right-handed alpha
Helix 30
30
B
384 389Right-handed alpha
Helix 31
31
B
393 396Right-handed 310
Helix 32
32
B
406 418Right-handed alpha
Helix 33
33
B
428 434Right-handed 310
Helix 34
34
B
445 458Right-handed alpha
Helix 35
35
B
536 555Right-handed alpha
Helix 36
36
B
559 570Right-handed alpha
Helix 37
37
B
591 596Right-handed alpha
Helix 38
38
B
601 606Right-handed alpha
Helix 39
39
B
615 625Right-handed alpha
Helix 40
40
B
629 638Right-handed alpha
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There are 18 sheets in PDB entry 3I6S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
249 254parallel
Strand 3
A
139 144parallel
Strand 4
A
280 283parallel
Strand 5
A
310 314parallel
Strand 6
A
333 339parallel
Strand 7
A
501 504parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 190first strand
Strand 2
A
249 254parallel
Strand 3
A
139 144parallel
Strand 4
A
280 283parallel
Strand 5
A
310 314parallel
Strand 6
A
333 339parallel
Strand 7
A
480 481anti-parallel
Strand 8
A
582 583parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 233first strand
Strand 2
A
236 241anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 257first strand
Strand 2
A
260 261anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
343 350first strand
Strand 2
A
355 359anti-parallel
Strand 3
A
441 444anti-parallel
Strand 4
A
421 425parallel
Strand 5
A
398 401parallel
Strand 6
A
368 374parallel
Strand 7
A
463 472anti-parallel
Strand 8
A
343 350anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 511first strand
Strand 2
A
531 534anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 521first strand
Strand 2
A
525 527anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
610 611first strand
Strand 2
A
670 680anti-parallel
Strand 3
A
715 724anti-parallel
Strand 4
A
698 703anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
657 661first strand
Strand 2
A
747 756parallel
Strand 3
A
734 741anti-parallel
Strand 4
A
686 693anti-parallel
Strand 5
A
706 709anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 190first strand
Strand 2
B
249 254parallel
Strand 3
B
139 143parallel
Strand 4
B
280 283parallel
Strand 5
B
310 314parallel
Strand 6
B
333 339parallel
Strand 7
B
501 504parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 190first strand
Strand 2
B
249 254parallel
Strand 3
B
139 143parallel
Strand 4
B
280 283parallel
Strand 5
B
310 314parallel
Strand 6
B
333 339parallel
Strand 7
B
480 481anti-parallel
Strand 8
B
582 583parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 233first strand
Strand 2
B
236 241anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 257first strand
Strand 2
B
260 261anti-parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
343 350first strand
Strand 2
B
355 359anti-parallel
Strand 3
B
441 444anti-parallel
Strand 4
B
421 425parallel
Strand 5
B
398 401parallel
Strand 6
B
368 374parallel
Strand 7
B
463 472anti-parallel
Strand 8
B
343 350anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 511first strand
Strand 2
B
531 534anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
519 521first strand
Strand 2
B
525 527anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
610 611first strand
Strand 2
B
670 680anti-parallel
Strand 3
B
715 724anti-parallel
Strand 4
B
698 703anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
657 661first strand
Strand 2
B
747 756parallel
Strand 3
B
734 741anti-parallel
Strand 4
B
686 693anti-parallel
Strand 5
B
706 709anti-parallel
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