Analysis of interatomic Contacts of Structural Units in PDB entry:
3I86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3I86 entry

There are 2 chains in PDB entry 3I86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 109TYR 244
B
 GLY 107TYR 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3I86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
109 124Right-handed alpha
Helix 2
2
A
144 149Right-handed 310
Helix 3
3
A
154 165Right-handed alpha
Helix 4
4
A
173 178Right-handed alpha
Helix 5
5
A
187 189Right-handed 310
Helix 6
6
A
198 202Right-handed 310
Helix 7
7
B
110 124Right-handed alpha
Helix 8
8
B
144 149Right-handed 310
Helix 9
9
B
154 165Right-handed alpha
Helix 10
10
B
173 178Right-handed alpha
Helix 11
11
B
187 189Right-handed 310
Helix 12
12
B
198 202Right-handed 310
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There are 6 sheets in PDB entry 3I86. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
151 152anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 185first strand
Strand 2
A
237 240anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 197first strand
Strand 2
A
204 210anti-parallel
Strand 3
A
213 219anti-parallel
Strand 4
A
223 228anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 142first strand
Strand 2
B
151 152anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 185first strand
Strand 2
B
237 240anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 197first strand
Strand 2
B
204 210anti-parallel
Strand 3
B
213 216anti-parallel
Strand 4
B
225 228anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il