Analysis of interatomic Contacts of Structural Units in PDB entry:
3IDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3IDV entry

There is 1 chain in PDB entry 3IDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 54SER 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 3IDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
71 77Right-handed alpha
Helix 2
2
A
91 110Right-handed alpha
Helix 3
3
A
125 132Right-handed alpha
Helix 4
4
A
156 169Right-handed alpha
Helix 5
5
A
186 194Right-handed alpha
Helix 6
6
A
207 211Right-handed 310
Helix 7
7
A
212 225Right-handed alpha
Helix 8
8
A
240 247Right-handed alpha
Helix 9
9
A
271 283Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3IDV. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 61first strand
Strand 2
A
64 66anti-parallel
Strand 3
A
117 121parallel
Strand 4
A
81 87parallel
Strand 5
A
139 144anti-parallel
Strand 6
A
147 150anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
232 236parallel
Strand 3
A
196 202parallel
Strand 4
A
254 259anti-parallel
Strand 5
A
262 265anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il